RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PRO3102Q9H379 93 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 ZSWIM6Q9HCJ5 1215 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 CNPY2Q9Y2B0 182 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 GTF3C3Q9Y5Q9 886 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 PNMA6FA0A0J9YX94 578 aa27.75■■■□□ 2.03
C9orf3-207ENST00000445181 FXR1P51114 621 aaKnown RBP eCLIP27.75■■■□□ 2.03
C9orf3-207ENST00000445181 APOBRQ0VD83 1088 aa27.75■■■□□ 2.03
C9orf3-207ENST00000445181 TRAF1Q13077 416 aa27.75■■■□□ 2.03
C9orf3-207ENST00000445181 CMTR1Q8N1G2 835 aaKnown RBP27.75■■■□□ 2.03
C9orf3-207ENST00000445181 RRP36Q96EU6 259 aaKnown RBP27.75■■■□□ 2.03
C9orf3-207ENST00000445181 TM6SF1Q9BZW5 370 aa27.75■■■□□ 2.03
C9orf3-207ENST00000445181 RBM28Q9NW13 759 aaKnown RBP27.75■■■□□ 2.03
C9orf3-207ENST00000445181 SEC63Q9UGP8 760 aaKnown RBP27.75■■■□□ 2.03
C9orf3-207ENST00000445181 PCDHA1Q9Y5I3 950 aa27.75■■■□□ 2.03
C9orf3-207ENST00000445181 SYNGAP1Q96PV0 1343 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 GOLGA8AA7E2F4 631 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 GOLGA8BA8MQT2 603 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 SEC24BO95487 1268 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 MYCNP04198 464 aaPredicted RBP27.74■■■□□ 2.03
C9orf3-207ENST00000445181 SMARCA1P28370 1054 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 RTN1Q16799 776 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 SLC30A10Q6XR72 485 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 MCF2L2Q86YR7 1114 aa27.74■■■□□ 2.03
C9orf3-207ENST00000445181 SRBD1Q8N5C6 995 aaKnown RBP27.74■■■□□ 2.03
C9orf3-207ENST00000445181 UPF3BQ9BZI7 483 aaKnown RBP27.74■■■□□ 2.03
C9orf3-207ENST00000445181 SOWAHBA6NEL2 793 aa27.73■■■□□ 2.03
C9orf3-207ENST00000445181 PPP1R11O60927 126 aaPredicted RBP27.73■■■□□ 2.03
C9orf3-207ENST00000445181 SYN1P17600 705 aa27.73■■■□□ 2.03
C9orf3-207ENST00000445181 MAMDC4Q6UXC1 1216 aa27.73■■■□□ 2.03
C9orf3-207ENST00000445181 TMTC3Q6ZXV5 915 aa27.73■■■□□ 2.03
C9orf3-207ENST00000445181 CCDC82Q8N4S0 544 aa27.73■■■□□ 2.03
C9orf3-207ENST00000445181 FGD4Q96M96 766 aa27.73■■■□□ 2.03
C9orf3-207ENST00000445181 ASB14A6NK59 587 aa27.72■■■□□ 2.03
C9orf3-207ENST00000445181 KBTBD13C9JR72 458 aa27.72■■■□□ 2.03
C9orf3-207ENST00000445181 ZNF865P0CJ78 1059 aaPredicted RBP27.72■■■□□ 2.03
C9orf3-207ENST00000445181 ANAPC15P60006 121 aa27.72■■■□□ 2.03
C9orf3-207ENST00000445181 RPS6P62753 249 aaKnown RBP27.72■■■□□ 2.03
C9orf3-207ENST00000445181 C8orf34Q49A92 452 aa27.72■■■□□ 2.03
C9orf3-207ENST00000445181 ARMCX2Q7L311 632 aa27.72■■■□□ 2.03
C9orf3-207ENST00000445181 RGS22Q8NE09 1264 aa27.72■■■□□ 2.03
C9orf3-207ENST00000445181 PURBQ96QR8 312 aaKnown RBP27.72■■■□□ 2.03
C9orf3-207ENST00000445181 ADD3Q9UEY8 706 aaKnown RBP27.72■■■□□ 2.03
C9orf3-207ENST00000445181 RARBP10826 455 aa27.71■■■□□ 2.03
C9orf3-207ENST00000445181 METAP2P50579 478 aaKnown RBP eCLIP27.71■■■□□ 2.03
C9orf3-207ENST00000445181 ATN1P54259 1190 aaPredicted RBP27.71■■■□□ 2.03
C9orf3-207ENST00000445181 FBXL16Q8N461 479 aa27.71■■■□□ 2.03
C9orf3-207ENST00000445181 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.71■■■□□ 2.03
C9orf3-207ENST00000445181 ZHX1Q9UKY1 873 aaPredicted RBP27.71■■■□□ 2.03
C9orf3-207ENST00000445181 SNAI1O95863 264 aaPredicted RBP27.7■■■□□ 2.02
C9orf3-207ENST00000445181 RCAN1P53805 252 aa27.7■■■□□ 2.02
C9orf3-207ENST00000445181 LRRC41Q15345 812 aa27.7■■■□□ 2.02
C9orf3-207ENST00000445181 XPNPEP3Q9NQH7 507 aa27.7■■■□□ 2.02
C9orf3-207ENST00000445181 PDRG1Q9NUG6 133 aa27.7■■■□□ 2.02
C9orf3-207ENST00000445181 CFBP00751 764 aa27.69■■■□□ 2.02
C9orf3-207ENST00000445181 AKR1A1P14550 325 aa27.69■■■□□ 2.02
C9orf3-207ENST00000445181 GDF15Q99988 308 aa27.69■■■□□ 2.02
C9orf3-207ENST00000445181 AGXT2Q9BYV1 514 aa27.69■■■□□ 2.02
C9orf3-207ENST00000445181 MAF1Q9H063 256 aa27.69■■■□□ 2.02
C9orf3-207ENST00000445181 TRIOBPQ9H2D6 2365 aa27.68■■■□□ 2.02
C9orf3-207ENST00000445181 CCDC196A0A1B0GTZ2 297 aa27.68■■■□□ 2.02
C9orf3-207ENST00000445181 TBC1D5Q92609 795 aa27.68■■■□□ 2.02
C9orf3-207ENST00000445181 MPHOSPH6Q99547 160 aaKnown RBP27.68■■■□□ 2.02
C9orf3-207ENST00000445181 ABHD16BQ9H3Z7 469 aa27.68■■■□□ 2.02
C9orf3-207ENST00000445181 ASTN1O14525 1302 aa27.67■■■□□ 2.02
C9orf3-207ENST00000445181 hCG_1642624A0A1W2PR95 340 aa27.67■■■□□ 2.02
C9orf3-207ENST00000445181 ADCYAP1R1P41586 468 aa27.67■■■□□ 2.02
C9orf3-207ENST00000445181 ALDH5A1P51649 535 aaPredicted RBP27.67■■■□□ 2.02
C9orf3-207ENST00000445181 ACVR2BQ13705 512 aa27.67■■■□□ 2.02
C9orf3-207ENST00000445181 PPP2R5BQ15173 497 aa27.67■■■□□ 2.02
C9orf3-207ENST00000445181 FAM184BQ9ULE4 1060 aa27.67■■■□□ 2.02
C9orf3-207ENST00000445181 MCM3APO60318 1980 aa27.67■■■□□ 2.02
C9orf3-207ENST00000445181 PGK1P00558 417 aa27.66■■■□□ 2.02
C9orf3-207ENST00000445181 TOB2Q14106 344 aaPredicted RBP27.66■■■□□ 2.02
C9orf3-207ENST00000445181 SLC39A5Q6ZMH5 540 aa27.66■■■□□ 2.02
C9orf3-207ENST00000445181 DNERQ8NFT8 737 aa27.66■■■□□ 2.02
C9orf3-207ENST00000445181 DDX49Q9Y6V7 483 aaKnown RBP27.66■■■□□ 2.02
C9orf3-207ENST00000445181 LCTP09848 1927 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 A0A1W2PPC1 479 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 B4DLN1 442 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 CDC27P30260 824 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 BMP8BP34820 402 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 MAGEA10P43363 369 aaPredicted RBP27.65■■■□□ 2.02
C9orf3-207ENST00000445181 MRPL12P52815 198 aaKnown RBP27.65■■■□□ 2.02
C9orf3-207ENST00000445181 RTP1P59025 263 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 RNF180Q86T96 592 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 SYTL5Q8TDW5 730 aaPredicted RBP27.65■■■□□ 2.02
C9orf3-207ENST00000445181 FERMT2Q96AC1 680 aa27.65■■■□□ 2.02
C9orf3-207ENST00000445181 LENG1Q96BZ8 264 aaPredicted RBP27.65■■■□□ 2.02
C9orf3-207ENST00000445181 OPLAHO14841 1288 aa27.64■■■□□ 2.02
C9orf3-207ENST00000445181 ADD1P35611 737 aaKnown RBP27.64■■■□□ 2.02
C9orf3-207ENST00000445181 EEPD1Q7L9B9 569 aa27.64■■■□□ 2.02
C9orf3-207ENST00000445181 PCDH10Q9P2E7 1040 aa27.64■■■□□ 2.02
C9orf3-207ENST00000445181 CNTNAP5Q8WYK1 1306 aa27.64■■■□□ 2.01
C9orf3-207ENST00000445181 LOC102724159A0A0B4J2E5 919 aa27.63■■■□□ 2.01
C9orf3-207ENST00000445181 GCOM1H8Y6P7 765 aaPredicted RBP27.63■■■□□ 2.01
C9orf3-207ENST00000445181 POLR2MP0CAP2 368 aa27.63■■■□□ 2.01
C9orf3-207ENST00000445181 PDE4DQ08499 809 aa27.63■■■□□ 2.01
C9orf3-207ENST00000445181 PWP2Q15269 919 aaKnown RBP27.63■■■□□ 2.01
C9orf3-207ENST00000445181 HEATR3Q7Z4Q2 680 aa27.63■■■□□ 2.01
C9orf3-207ENST00000445181 TAAR1Q96RJ0 339 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms