RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 FBXO16Q8IX29 292 aaPredicted RBP25.37■■□□□ 1.65
TRAF4-205ENST00000444415 CMTR1Q8N1G2 835 aaKnown RBP25.37■■□□□ 1.65
TRAF4-205ENST00000444415 JAKMIP1Q96N16 626 aaKnown RBP25.37■■□□□ 1.65
TRAF4-205ENST00000444415 HTATIP2Q9BUP3 242 aa25.37■■□□□ 1.65
TRAF4-205ENST00000444415 SPZ1Q9BXG8 430 aa25.37■■□□□ 1.65
TRAF4-205ENST00000444415 EPB41L2O43491 1005 aaKnown RBP25.36■■□□□ 1.65
TRAF4-205ENST00000444415 RARBP10826 455 aa25.36■■□□□ 1.65
TRAF4-205ENST00000444415 EDNRBP24530 442 aa25.36■■□□□ 1.65
TRAF4-205ENST00000444415 TAPT1Q6NXT6 567 aa25.36■■□□□ 1.65
TRAF4-205ENST00000444415 CTCFLQ8NI51 663 aaPredicted RBP25.36■■□□□ 1.65
TRAF4-205ENST00000444415 SYTL5Q8TDW5 730 aaPredicted RBP25.36■■□□□ 1.65
TRAF4-205ENST00000444415 XPNPEP3Q9NQH7 507 aa25.36■■□□□ 1.65
TRAF4-205ENST00000444415 PDGFCQ9NRA1 345 aa25.36■■□□□ 1.65
TRAF4-205ENST00000444415 SYNRGQ9UMZ2 1314 aa25.36■■□□□ 1.65
TRAF4-205ENST00000444415 MYADML2A6NDP7 307 aa25.35■■□□□ 1.65
TRAF4-205ENST00000444415 EEPD1Q7L9B9 569 aa25.35■■□□□ 1.65
TRAF4-205ENST00000444415 MICU3Q86XE3 530 aa25.35■■□□□ 1.65
TRAF4-205ENST00000444415 FAM184BQ9ULE4 1060 aa25.35■■□□□ 1.65
TRAF4-205ENST00000444415 MRPL11Q9Y3B7 192 aaKnown RBP25.35■■□□□ 1.65
TRAF4-205ENST00000444415 SLC12A7Q9Y666 1083 aa25.35■■□□□ 1.65
TRAF4-205ENST00000444415 PNMA6FA0A0J9YX94 578 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 PIBF1Q8WXW3 757 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 DPF3Q92784 378 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 PCDHA1Q9Y5I3 950 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 KIF5BP33176 963 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 ADCYAP1R1P41586 468 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 LRRC26Q2I0M4 334 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 TMTC3Q6ZXV5 915 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 FANCBQ8NB91 859 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 TAAR1Q96RJ0 339 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 MAF1Q9H063 256 aa25.34■■□□□ 1.65
TRAF4-205ENST00000444415 ADD3Q9UEY8 706 aaKnown RBP25.34■■□□□ 1.65
TRAF4-205ENST00000444415 KIAA1217Q5T5P2 1943 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 H0YGN5 161 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 CTAGE5O15320 804 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 DUSP11O75319 330 aaKnown RBP25.33■■□□□ 1.65
TRAF4-205ENST00000444415 HMGB1P09429 215 aaKnown RBP25.33■■□□□ 1.65
TRAF4-205ENST00000444415 SMARCA1P28370 1054 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 HSD17B4P51659 736 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 CCSAPQ6IQ19 270 aaPredicted RBP25.33■■□□□ 1.65
TRAF4-205ENST00000444415 ARRDC4Q8NCT1 418 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 KLHDC9Q8NEP7 349 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 DNERQ8NFT8 737 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 AGXT2Q9BYV1 514 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 SENP6Q9GZR1 1112 aaPredicted RBP25.33■■□□□ 1.65
TRAF4-205ENST00000444415 FAM217BQ9NTX9 383 aaPredicted RBP25.33■■□□□ 1.65
TRAF4-205ENST00000444415 PCDH10Q9P2E7 1040 aa25.33■■□□□ 1.65
TRAF4-205ENST00000444415 GNEQ9Y223 722 aaKnown RBP25.33■■□□□ 1.65
TRAF4-205ENST00000444415 LOC102724159A0A0B4J2E5 919 aa25.32■■□□□ 1.64
TRAF4-205ENST00000444415 CALM1P0DP23 149 aa25.32■■□□□ 1.64
TRAF4-205ENST00000444415 CALM2P0DP24 149 aa25.32■■□□□ 1.64
TRAF4-205ENST00000444415 CALM3P0DP25 149 aa25.32■■□□□ 1.64
TRAF4-205ENST00000444415 RPS6KB1P23443 525 aa25.32■■□□□ 1.64
TRAF4-205ENST00000444415 PWP2Q15269 919 aaKnown RBP25.32■■□□□ 1.64
TRAF4-205ENST00000444415 FUT2Q10981 343 aa25.31■■□□□ 1.64
TRAF4-205ENST00000444415 BLOC1S2Q6QNY1 142 aa25.31■■□□□ 1.64
TRAF4-205ENST00000444415 Q6ZUG5 572 aa25.31■■□□□ 1.64
TRAF4-205ENST00000444415 UPF3AQ9H1J1 476 aaKnown RBP25.31■■□□□ 1.64
TRAF4-205ENST00000444415 VTA1Q9NP79 307 aa25.31■■□□□ 1.64
TRAF4-205ENST00000444415 CNTNAP5Q8WYK1 1306 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 KLF18A0A0U1RQI7 1052 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 CFBP00751 764 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 MYCNP04198 464 aaPredicted RBP25.3■■□□□ 1.64
TRAF4-205ENST00000444415 SMPD1P17405 629 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 CASTP20810 708 aaKnown RBP25.3■■□□□ 1.64
TRAF4-205ENST00000444415 MCF2L2Q86YR7 1114 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 FBXL16Q8N461 479 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 LZTS2Q9BRK4 669 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 PHF24Q9UPV7 400 aa25.3■■□□□ 1.64
TRAF4-205ENST00000444415 hCG_1642624A0A1W2PR95 340 aa25.29■■□□□ 1.64
TRAF4-205ENST00000444415 KBTBD13C9JR72 458 aa25.29■■□□□ 1.64
TRAF4-205ENST00000444415 CDC27P30260 824 aa25.29■■□□□ 1.64
TRAF4-205ENST00000444415 GJA9P57773 515 aa25.29■■□□□ 1.64
TRAF4-205ENST00000444415 NKX3-2P78367 333 aa25.29■■□□□ 1.64
TRAF4-205ENST00000444415 APOBRQ0VD83 1088 aa25.29■■□□□ 1.64
TRAF4-205ENST00000444415 RBM47A0AV96 593 aaKnown RBP25.28■■□□□ 1.64
TRAF4-205ENST00000444415 ZBTB43O43298 467 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 EVI5O60447 810 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 CST5P28325 142 aaPredicted RBP25.28■■□□□ 1.64
TRAF4-205ENST00000444415 HOXA13P31271 388 aaPredicted RBP25.28■■□□□ 1.64
TRAF4-205ENST00000444415 GNAQP50148 359 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 TNFAIP2Q03169 654 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 CCDC82Q8N4S0 544 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 BRF1Q92994 677 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 FERMT2Q96AC1 680 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 ZSWIM6Q9HCJ5 1215 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 ATN1P54259 1190 aaPredicted RBP25.28■■□□□ 1.64
TRAF4-205ENST00000444415 RNF180Q86T96 592 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 C7orf61Q8IZ16 206 aa25.28■■□□□ 1.64
TRAF4-205ENST00000444415 RRP36Q96EU6 259 aaKnown RBP25.28■■□□□ 1.64
TRAF4-205ENST00000444415 NID2Q14112 1375 aa25.27■■□□□ 1.64
TRAF4-205ENST00000444415 SZT2Q5T011 3432 aa25.27■■□□□ 1.64
TRAF4-205ENST00000444415 SEC24BO95487 1268 aa25.27■■□□□ 1.64
TRAF4-205ENST00000444415 SNX17Q15036 470 aa25.27■■□□□ 1.64
TRAF4-205ENST00000444415 RMDN3Q96TC7 470 aa25.27■■□□□ 1.64
TRAF4-205ENST00000444415 PXMP2Q9NR77 195 aa25.27■■□□□ 1.64
TRAF4-205ENST00000444415 LAMA2P24043 3122 aaKnown RBP25.27■■□□□ 1.64
TRAF4-205ENST00000444415 PDE4DQ08499 809 aa25.26■■□□□ 1.63
TRAF4-205ENST00000444415 TOB2Q14106 344 aaPredicted RBP25.26■■□□□ 1.63
TRAF4-205ENST00000444415 KCNA10Q16322 511 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms