RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 PCDHGC5Q9Y5F6 944 aa17.35■□□□□ 0.37
SYNCRIP-203ENST00000444272 EYA4O95677 639 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 NDUFV1P49821 464 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 PLCD1P51178 756 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 RSPO4Q2I0M5 234 aaPredicted RBP17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 GPR179Q6PRD1 2367 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 TMEM192Q8IY95 271 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 SP7Q8TDD2 431 aaPredicted RBP17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 MSLNLQ96KJ4 702 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 ARHGEF10LQ9HCE6 1279 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 INCENPQ9NQS7 918 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 NOD1Q9Y239 953 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 TMX2Q9Y320 296 aa17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 MYO5AQ9Y4I1 1855 aaKnown RBP17.34■□□□□ 0.37
SYNCRIP-203ENST00000444272 MICAL3Q7RTP6 2002 aa17.33■□□□□ 0.37
SYNCRIP-203ENST00000444272 LMNAP02545 664 aaKnown RBP17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 MYL3P08590 195 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 PURAQ00577 322 aaKnown RBP17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 ZBTB33Q86T24 672 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 FBXO11Q86XK2 927 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 HINFPQ9BQA5 517 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 SH2D4AQ9H788 454 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 PDGFCQ9NRA1 345 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 POLR3EQ9NVU0 708 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 SCN10AQ9Y5Y9 1956 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 RALGAPA2Q2PPJ7 1873 aa17.33■□□□□ 0.36
SYNCRIP-203ENST00000444272 EFCAB14O75071 495 aa17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 CSPG5O95196 566 aa17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 ARID4AP29374 1257 aaPredicted RBP17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 HTRA4P83105 476 aaPredicted RBP17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 IKBKEQ14164 716 aa17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 SIAH1Q8IUQ4 282 aa17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 AFAP1L1Q8TED9 768 aa17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 PHF7Q9BWX1 381 aaPredicted RBP17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 SH2B1Q9NRF2 756 aaPredicted RBP17.32■□□□□ 0.36
SYNCRIP-203ENST00000444272 NAV1Q8NEY1 1877 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 NBNO60934 754 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 CXCL10P02778 98 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 ICA1Q05084 483 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 TMEM179Q6ZVK1 233 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 MYOCDQ8IZQ8 938 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 SMRP1Q8NCR6 262 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 AKAP2Q9Y2D5 859 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 Q9Y3F1 56 aa17.31■□□□□ 0.36
SYNCRIP-203ENST00000444272 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 ADAM15Q13444 863 aa17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 ASTLQ6HA08 431 aaPredicted RBP17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 LRRC8DQ7L1W4 858 aa17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 CCDC155Q8N6L0 562 aa17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 CAGE1Q8TC20 777 aa17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 MTG1Q9BT17 334 aaPredicted RBP17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 USP15Q9Y4E8 981 aaPredicted RBP17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
SYNCRIP-203ENST00000444272 MYH8P13535 1937 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 IL16Q14005 1332 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 SELPP16109 830 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 GABPAQ06546 454 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 TFCP2Q12800 502 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 NFRKBQ6P4R8 1299 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 CPXCR1Q8N123 301 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 FAM133AQ8N9E0 248 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 MIGA1Q8NAN2 632 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 GPHNQ9NQX3 736 aaPredicted RBP17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 SNRKQ9NRH2 765 aa17.29■□□□□ 0.36
SYNCRIP-203ENST00000444272 RAD21O60216 631 aa17.28■□□□□ 0.36
SYNCRIP-203ENST00000444272 EVX2Q03828 476 aa17.28■□□□□ 0.36
SYNCRIP-203ENST00000444272 FAM83BQ5T0W9 1011 aa17.28■□□□□ 0.36
SYNCRIP-203ENST00000444272 IQSEC1Q6DN90 963 aa17.28■□□□□ 0.36
SYNCRIP-203ENST00000444272 FBXO16Q8IX29 292 aaPredicted RBP17.28■□□□□ 0.36
SYNCRIP-203ENST00000444272 CLEC1BQ9P126 229 aa17.28■□□□□ 0.36
SYNCRIP-203ENST00000444272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.28■□□□□ 0.36
SYNCRIP-203ENST00000444272 E9PSI1 815 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 GRM6O15303 877 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 AMHP03971 560 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 POLR3DP05423 398 aaPredicted RBP17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 COASYQ13057 564 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 PTGISQ16647 500 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 KIAA0319Q5VV43 1072 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 TAPT1Q6NXT6 567 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.27■□□□□ 0.362e-6■■□□□ 12
SYNCRIP-203ENST00000444272 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 LMAN2LQ9H0V9 348 aa17.27■□□□□ 0.36
SYNCRIP-203ENST00000444272 OTOGLQ3ZCN5 2332 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 PARNO95453 639 aaKnown RBP17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 CYP7A1P22680 504 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 CTNNB1P35222 781 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 CPT1AP50416 773 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 PTPN11Q06124 597 aaPredicted RBP17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 ANGPT1Q15389 498 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 DCLK2Q8N568 766 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 CYP2W1Q8TAV3 490 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms