RNA–Protein interactions for RNA: ENST00000442985.1

SPEN-203, Transcript of spen family transcriptional repressor, humanhuman

TSL 5

Gene SPEN, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-203ENST00000442985 PPP1R42Q7Z4L9 355 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 NLRP10Q86W26 655 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 XAGE3Q8WTP9 111 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 FAM161BQ96MY7 647 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 TRIM56Q9BRZ2 755 aaKnown RBP6.23□□□□□ -1.41
SPEN-203ENST00000442985 RTFDC1Q9BY42 306 aaPredicted RBP6.23□□□□□ -1.41
SPEN-203ENST00000442985 RAD18Q9NS91 495 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 KCNK4Q9NYG8 393 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 ZNRF3Q9ULT6 936 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 MAPK8IP3Q9UPT6 1336 aa6.23□□□□□ -1.41
SPEN-203ENST00000442985 POLR2AP24928 1970 aaKnown RBP6.22□□□□□ -1.41
SPEN-203ENST00000442985 WISP1O95388 367 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 PROCP04070 461 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 NEFMP07197 916 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 VAMP1P23763 118 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 RIPK4P57078 832 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 CIAPIN1Q6FI81 312 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 LLGL2Q6P1M3 1020 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
SPEN-203ENST00000442985 SP8Q8IXZ3 490 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 CCDC146Q8IYE0 955 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 UTP4Q969X6 686 aaKnown RBP6.22□□□□□ -1.41
SPEN-203ENST00000442985 MCOLN1Q9GZU1 580 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 KCNQ5Q9NR82 932 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 TRMT112Q9UI30 125 aaKnown RBP6.22□□□□□ -1.41
SPEN-203ENST00000442985 SCN9AQ15858 1988 aa6.22□□□□□ -1.41
SPEN-203ENST00000442985 RTL9Q8NET4 1388 aa6.21□□□□□ -1.41
SPEN-203ENST00000442985 ADM5C9JUS6 153 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 PSMD14O00487 310 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 ENC1O14682 589 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 DDX3YO15523 660 aaKnown RBP6.21□□□□□ -1.42
SPEN-203ENST00000442985 BBOX1O75936 387 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 TCIRG1Q13488 830 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 GRAPQ13588 217 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 USP48Q86UV5 1035 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 SUPT20HQ8NEM7 779 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 GRAPLQ8TC17 118 aaPredicted RBP6.21□□□□□ -1.42
SPEN-203ENST00000442985 CELF1Q92879 486 aaKnown RBP6.21□□□□□ -1.42
SPEN-203ENST00000442985 TP53INP1Q96A56 240 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 SSBP4Q9BWG4 385 aaPredicted RBP6.21□□□□□ -1.42
SPEN-203ENST00000442985 TMX4Q9H1E5 349 aaPredicted RBP6.21□□□□□ -1.42
SPEN-203ENST00000442985 ATXN3LQ9H3M9 355 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 DBNDD1Q9H9R9 158 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 CBX8Q9HC52 389 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 CHPF2Q9P2E5 772 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 PGAP2Q9UHJ9 254 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 CNOT7Q9UIV1 285 aaKnown RBP6.21□□□□□ -1.42
SPEN-203ENST00000442985 ASTN2O75129 1339 aaPredicted RBP6.21□□□□□ -1.42
SPEN-203ENST00000442985 SH3TC1Q8TE82 1336 aa6.21□□□□□ -1.42
SPEN-203ENST00000442985 TIAF1O95411 115 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 ADH5P11766 374 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 MAP2K2P36507 400 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
SPEN-203ENST00000442985 HUNKP57058 714 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 GPSM2P81274 684 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 MRPL58Q14197 206 aaKnown RBP6.2□□□□□ -1.42
SPEN-203ENST00000442985 TBC1D10BQ4KMP7 808 aaPredicted RBP6.2□□□□□ -1.42
SPEN-203ENST00000442985 PCNX4Q63HM2 1172 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 DDX46Q7L014 1031 aaKnown RBP6.2□□□□□ -1.42
SPEN-203ENST00000442985 C12orf50Q8NA57 414 aaPredicted RBP6.2□□□□□ -1.42
SPEN-203ENST00000442985 FAM89AQ96GI7 184 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 FAM46AQ96IP4 442 aaKnown RBP6.2□□□□□ -1.42
SPEN-203ENST00000442985 MYRFLQ96LU7 910 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 VPS33BQ9H267 617 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 POLLQ9UGP5 575 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 LAS1LQ9Y4W2 734 aaKnown RBP6.2□□□□□ -1.42
SPEN-203ENST00000442985 CDHR2Q9BYE9 1310 aa6.2□□□□□ -1.42
SPEN-203ENST00000442985 PDE4DIPQ5VU43 2346 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.19□□□□□ -1.42
SPEN-203ENST00000442985 FAM155AB1AL88 458 aaPredicted RBP6.19□□□□□ -1.42
SPEN-203ENST00000442985 H7C1D1 291 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 RECKO95980 971 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 SOX4Q06945 474 aaPredicted RBP6.19□□□□□ -1.42
SPEN-203ENST00000442985 TNIP1Q15025 636 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 KIF4BQ2VIQ3 1234 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 HSP90AB3PQ58FF7 597 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 HGSNATQ68CP4 663 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 TTBK2Q6IQ55 1244 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 CDC37L1Q7L3B6 337 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 KRT26Q7Z3Y9 468 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 PDZD3Q86UT5 571 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 AGGF1Q8N302 714 aaeCLIP6.19□□□□□ -1.42
SPEN-203ENST00000442985 GIMAP7Q8NHV1 300 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 KCNB2Q92953 911 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 HHIPL1Q96JK4 782 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 MEGF10Q96KG7 1140 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 ISCA1Q9BUE6 129 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 METTL5Q9NRN9 209 aaKnown RBP6.19□□□□□ -1.42
SPEN-203ENST00000442985 TPSG1Q9NRR2 321 aa6.19□□□□□ -1.42
SPEN-203ENST00000442985 SCAF8Q9UPN6 1271 aaKnown RBP6.19□□□□□ -1.42
SPEN-203ENST00000442985 CHL1O00533 1208 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 ECE2O60344 883 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 ITGB2P05107 769 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 RGS19P49795 217 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 USP11P51784 963 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 ZNF157P51786 506 aaPredicted RBP6.18□□□□□ -1.42
SPEN-203ENST00000442985 ID3Q02535 119 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 ZNF252P-AS1Q0IIN9 211 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 MAP7Q14244 749 aa6.18□□□□□ -1.42
SPEN-203ENST00000442985 SF3B3Q15393 1217 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms