RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 PCDHA8Q9Y5H6 950 aa10.37□□□□□ -0.75
NR1I3-211ENST00000442691 ABCB11O95342 1321 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 POTECB2RU33 542 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 CTAGE5O15320 804 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 PTPREP23469 700 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 CMA1P23946 247 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 TOB1P50616 345 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 PPATQ06203 517 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 FOXD4L6Q3SYB3 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 MOXD1Q6UVY6 613 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 FOXD4L3Q6VB84 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 ELOA2Q8IYF1 753 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 PROCA1Q8NCQ7 364 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 AFG3L2Q9Y4W6 797 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 PCDHA1Q9Y5I3 950 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 SRPRBQ9Y5M8 271 aaKnown RBP10.36□□□□□ -0.75
NR1I3-211ENST00000442691 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
NR1I3-211ENST00000442691 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 CXCL11O14625 94 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 ATP2A1O14983 1001 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 RAD21O60216 631 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-211ENST00000442691 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-211ENST00000442691 VCAM1P19320 739 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 SLC16A2P36021 539 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 MTMR2Q13614 643 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 VGLL4Q14135 290 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-211ENST00000442691 PPP4R3AQ6IN85 833 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
NR1I3-211ENST00000442691 PADI6Q6TGC4 694 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-211ENST00000442691 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 ERO1BQ86YB8 467 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 FAM117AQ9C073 453 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 PPP1R9AQ9ULJ8 1098 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 PCDHA7Q9UN72 937 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
NR1I3-211ENST00000442691 RABGAP1Q9Y3P9 1069 aa10.35□□□□□ -0.75
NR1I3-211ENST00000442691 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 OATP04181 439 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 ICAM1P05362 532 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 USP11P51784 963 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 SPP2Q13103 211 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 PPIL2Q13356 520 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 TKFCQ3LXA3 575 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 LDLRAD1Q5T700 205 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 RESP18Q5W5W9 173 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
NR1I3-211ENST00000442691 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 ZKSCAN4Q969J2 545 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-211ENST00000442691 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-211ENST00000442691 FTOQ9C0B1 505 aaKnown RBP eCLIP10.34□□□□□ -0.75
NR1I3-211ENST00000442691 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 SLC38A10Q9HBR0 1119 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 PCDHB6Q9Y5E3 794 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 PHIPQ8WWQ0 1821 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
NR1I3-211ENST00000442691 TCHHQ07283 1943 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 SLC26A4O43511 780 aa10.33□□□□□ -0.76
NR1I3-211ENST00000442691 KINO60870 393 aaKnown RBP10.33□□□□□ -0.76
NR1I3-211ENST00000442691 HOXA7P31268 230 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-211ENST00000442691 LONP1P36776 959 aaKnown RBP10.33□□□□□ -0.76
NR1I3-211ENST00000442691 PRSS12P56730 875 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms