RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 LRRC41Q15345 812 aa18■□□□□ 0.47
NLE1-202ENST00000442241 CCDC96Q2M329 555 aa18■□□□□ 0.47
NLE1-202ENST00000442241 IPO4Q8TEX9 1081 aaKnown RBP18■□□□□ 0.47
NLE1-202ENST00000442241 TSPYL1Q9H0U9 437 aa18■□□□□ 0.47
NLE1-202ENST00000442241 REXO2Q9Y3B8 237 aaKnown RBP18■□□□□ 0.47
NLE1-202ENST00000442241 UTRNP46939 3433 aa18■□□□□ 0.47
NLE1-202ENST00000442241 GAKO14976 1311 aa18■□□□□ 0.47
NLE1-202ENST00000442241 ENC1O14682 589 aa18■□□□□ 0.47
NLE1-202ENST00000442241 PLCG2P16885 1265 aa18■□□□□ 0.47
NLE1-202ENST00000442241 CALCRLQ16602 461 aa18■□□□□ 0.47
NLE1-202ENST00000442241 GALNT17Q6IS24 598 aa18■□□□□ 0.47
NLE1-202ENST00000442241 LZTS2Q9BRK4 669 aa18■□□□□ 0.47
NLE1-202ENST00000442241 ARGLU1Q9NWB6 273 aaPredicted RBP18■□□□□ 0.47
NLE1-202ENST00000442241 USP17L10C9JJH3 530 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 IDEP14735 1019 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 SPAG1Q07617 926 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 KCNK18Q7Z418 384 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 ADGRF4Q8IZF3 695 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 PROM2Q8N271 834 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 KIAA0895Q8NCT3 520 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 TUBGCP2Q9BSJ2 902 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 NAA15Q9BXJ9 866 aaKnown RBP17.99■□□□□ 0.47
NLE1-202ENST00000442241 PARD6BQ9BYG5 372 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 ZC3H12CQ9C0D7 883 aaKnown RBP17.99■□□□□ 0.47
NLE1-202ENST00000442241 MAGEC2Q9UBF1 373 aaPredicted RBP17.99■□□□□ 0.47
NLE1-202ENST00000442241 LRWD1Q9UFC0 647 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 ITIH6Q6UXX5 1313 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 G3V3G9 751 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 ARHGAP25P42331 645 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 ADCY7P51828 1080 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 GRB10Q13322 594 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 CYP26C1Q6V0L0 522 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 JMJD4Q9H9V9 463 aa17.99■□□□□ 0.47
NLE1-202ENST00000442241 MYMKA6NI61 221 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 LGALS16A8MUM7 142 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 ATP8B1O43520 1251 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 MTIF2P46199 727 aaKnown RBP17.98■□□□□ 0.47
NLE1-202ENST00000442241 PDE4CQ08493 712 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 STIM1Q13586 685 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 CNOT6LQ96LI5 555 aaKnown RBP17.98■□□□□ 0.47
NLE1-202ENST00000442241 PNMA5Q96PV4 448 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
NLE1-202ENST00000442241 HDAC6Q9UBN7 1215 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 UBR3Q6ZT12 1888 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 RASSF10A6NK89 507 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 RAD51AP2Q09MP3 1159 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 KCNB1Q14721 858 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 ECM1Q16610 540 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 MUM1L1Q5H9M0 696 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 CDC42EP5Q6NZY7 148 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 TMTC1Q8IUR5 882 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 P2RX5Q93086 422 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 RIOX1Q9H6W3 641 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 TBC1D7Q9P0N9 293 aa17.98■□□□□ 0.47
NLE1-202ENST00000442241 POLR3GO15318 223 aaPredicted RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 SASH3O75995 380 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 ADRA2BP18089 450 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 PRPHP41219 470 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 WDR59Q6PJI9 974 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 KIAA0825Q8IV33 1275 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 ZNF507Q8TCN5 953 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 FAM163AQ96GL9 167 aaPredicted RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 SEMA6BQ9H3T3 888 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 BLOC1S4Q9NUP1 217 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 SERPINB13Q9UIV8 391 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 LUC7L2Q9Y383 392 aaKnown RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 SSBP05455 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
NLE1-202ENST00000442241 RHOXF2BP0C7M4 288 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 SHMT1P34896 483 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 HSPA1LP34931 641 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 TBC1D8BQ0IIM8 1120 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 NCAPH2Q6IBW4 605 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 TMED8Q6PL24 325 aaPredicted RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 SLF2Q8IX21 1173 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 CALML4Q96GE6 196 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 RHOXF2Q9BQY4 288 aa17.97■□□□□ 0.47
NLE1-202ENST00000442241 QTRT2Q9H974 415 aaKnown RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 FEZ2Q9UHY8 353 aaPredicted RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 EPN1Q9Y6I3 576 aaPredicted RBP17.97■□□□□ 0.47
NLE1-202ENST00000442241 USP17L15C9J2P7 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L13C9JLJ4 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L11C9JVI0 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L18D6R9N7 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L22D6RA61 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L17D6RBQ6 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L19D6RCP7 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L20D6RJB6 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 TRIM21P19474 475 aaKnown RBP17.96■□□□□ 0.47
NLE1-202ENST00000442241 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
NLE1-202ENST00000442241 CYP27A1Q02318 531 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 GABPAQ06546 454 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L24Q0WX57 530 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 USP17L6PQ6QN14 398 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 RSRC2Q7L4I2 434 aaKnown RBP17.96■□□□□ 0.47
NLE1-202ENST00000442241 SRCAPQ6ZRS2 3230 aa17.96■□□□□ 0.47
NLE1-202ENST00000442241 LAD1O00515 517 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms