RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 FAM155AB1AL88 458 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-206ENST00000441438 DYNC1I1O14576 645 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 PYGBP11216 843 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 LBRQ14739 615 aaKnown RBP11.79□□□□□ -0.52
SYNE2-206ENST00000441438 RABEP1Q15276 862 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 POMZP3Q6PJE2 187 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 ZER1Q7Z7L7 766 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 EMID1Q96A84 441 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-206ENST00000441438 CRBNQ96SW2 442 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 C7orf25Q9BPX7 421 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 OBP2AQ9NY56 170 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 HECAQ9UBI9 543 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-206ENST00000441438 DKK3Q9UBP4 350 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
SYNE2-206ENST00000441438 WNK3Q9BYP7 1800 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 ARPC4-TTLL3A0A0A6YYG9 625 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 KRBA1A5PL33 1030 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 KIAA0753Q2KHM9 967 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 MEX3CQ5U5Q3 659 aaKnown RBP11.78□□□□□ -0.52
SYNE2-206ENST00000441438 C16orf86Q6ZW13 317 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 IQCA1Q86XH1 822 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 C8orf76Q96K31 380 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 EGFL7Q9UHF1 273 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 ADAMTS8Q9UP79 889 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 PLOD2O00469 737 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 PIN1Q13526 163 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-206ENST00000441438 SEMA3AQ14563 771 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 ASIC2Q16515 512 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 NAIF1Q69YI7 327 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-206ENST00000441438 DSTYKQ6XUX3 929 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 CCDC186Q7Z3E2 898 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 NKAPQ8N5F7 415 aaKnown RBP11.78□□□□□ -0.52
SYNE2-206ENST00000441438 CNDP1Q96KN2 507 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 NTPCRQ9BSD7 190 aaKnown RBP11.78□□□□□ -0.52
SYNE2-206ENST00000441438 HMX1Q9NP08 348 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-206ENST00000441438 SIRPGQ9P1W8 387 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 LACTBL1A8MY62 500 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 GUCA1CO95843 209 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 PEX5P50542 639 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 QPCTQ16769 361 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 KAZNQ674X7 775 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 TBC1D21Q8IYX1 336 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 TBC1D5Q92609 795 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 PDP2Q9P2J9 529 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 FAM50BQ9Y247 325 aa11.78□□□□□ -0.52
SYNE2-206ENST00000441438 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 ALG1L2C9J202 215 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 PIK3CDO00329 1044 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 CD4P01730 458 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 PRLRP16471 622 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 ETFBP38117 255 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 USP8P40818 1118 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 MAPK9P45984 424 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 KBTBD12Q3ZCT8 623 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 CAVIN4Q5BKX8 364 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 GBP7Q8N8V2 638 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-206ENST00000441438 IPMKQ8NFU5 416 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 ERMNQ8TAM6 284 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 PI4K2BQ8TCG2 481 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
SYNE2-206ENST00000441438 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 CEP295NLQ96MC4 621 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 BARD1Q99728 777 aaKnown RBP11.77□□□□□ -0.53
SYNE2-206ENST00000441438 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-206ENST00000441438 MYOM1P52179 1685 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 FAM221AA4D161 298 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 LDHBP07195 334 aaKnown RBP11.77□□□□□ -0.53
SYNE2-206ENST00000441438 SETMARQ53H47 684 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-206ENST00000441438 TOGARAM2Q6ZUX3 1019 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 SPERTQ8NA61 448 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 TACO1Q9BSH4 297 aaKnown RBP11.77□□□□□ -0.53
SYNE2-206ENST00000441438 TEX13BQ9BXU2 312 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 AIPL1Q9NZN9 384 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 STK39Q9UEW8 545 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
SYNE2-206ENST00000441438 PCNAP12004 261 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 SMAD4Q13485 552 aaKnown RBP11.76□□□□□ -0.53
SYNE2-206ENST00000441438 ATP13A4Q4VNC1 1196 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 NXNQ6DKJ4 435 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 ANKS3Q6ZW76 656 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 DPF3Q92784 378 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 COG8Q96MW5 612 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 RASSF4Q9H2L5 321 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 ZRANB1Q9UGI0 708 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 JRKLQ9Y4A0 524 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 CDK12Q9NYV4 1490 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-206ENST00000441438 NASPP49321 788 aaPredicted RBP11.76□□□□□ -0.53
SYNE2-206ENST00000441438 GOLGA2Q08379 1002 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 BNIP1Q12981 228 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 C20orf194Q5TEA3 1177 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 MSANTD4Q8NCY6 345 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 ZNF540Q8NDQ6 660 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 LRRC45Q96CN5 670 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms