RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RNF41Q9H4P4 317 aaPredicted RBP13.25□□□□□ -0.29
LTBR-203ENST00000441074 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 TRIM75PA6NK02 468 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 MYO1FO00160 1098 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 CHUKO15111 745 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 RGL2O15211 777 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 ZNF185O15231 689 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 BMP15O95972 392 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
LTBR-203ENST00000441074 CTDSPL2Q05D32 466 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 C2orf54Q08AI8 447 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 PAK1Q13153 545 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 GRIK5Q16478 980 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 WDR59Q6PJI9 974 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 FBXO33Q7Z6M2 555 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 SYMPKQ92797 1274 aaKnown RBP13.25□□□□□ -0.29
LTBR-203ENST00000441074 CABP5Q9NP86 173 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 CAPN11Q9UMQ6 739 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 A0A1W2PQC6 194 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 COBLO75128 1261 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 XBP1P17861 261 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 CYLC1P35663 651 aaPredicted RBP13.24□□□□□ -0.29
LTBR-203ENST00000441074 EPHB4P54760 987 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 TTMPQ5BVD1 217 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 EMBQ6PCB8 327 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
LTBR-203ENST00000441074 FERMT2Q96AC1 680 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 ARL8AQ96BM9 186 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 RRP36Q96EU6 259 aaKnown RBP13.24□□□□□ -0.29
LTBR-203ENST00000441074 PURBQ96QR8 312 aaKnown RBP13.24□□□□□ -0.29
LTBR-203ENST00000441074 HSF2BPO75031 334 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 IDEP14735 1019 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 MEA1Q16626 185 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 CRY2Q49AN0 593 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 TTC19Q6DKK2 380 aaPredicted RBP13.24□□□□□ -0.29
LTBR-203ENST00000441074 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 RUFY1Q96T51 708 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 SPON1Q9HCB6 807 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
LTBR-203ENST00000441074 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 GSG1L2A8MUP6 293 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 POLD1P28340 1107 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 PDCLQ13371 301 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 NEDD9Q14511 834 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 EMC10Q5UCC4 262 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 CREG2Q8IUH2 290 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 GIMAP7Q8NHV1 300 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 NELFBQ8WX92 580 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 LRRC1Q9BTT6 524 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 RNF26Q9BY78 433 aaPredicted RBP13.23□□□□□ -0.29
LTBR-203ENST00000441074 LACRTQ9GZZ8 138 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 JADE2Q9NQC1 790 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 DMGDHQ9UI17 866 aaKnown RBP13.23□□□□□ -0.29
LTBR-203ENST00000441074 GGA2Q9UJY4 613 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 SLC4A4Q9Y6R1 1079 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 H7C1D1 291 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 RDXP35241 583 aaKnown RBP13.23□□□□□ -0.29
LTBR-203ENST00000441074 PTGER2P43116 358 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 TDO2P48775 406 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 SMTNP53814 917 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 PLCB4Q15147 1175 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 CCDC170Q8IYT3 715 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
LTBR-203ENST00000441074 EPN3Q9H201 632 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
LTBR-203ENST00000441074 MCM8Q9UJA3 840 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 SNX12Q9UMY4 172 aa13.23□□□□□ -0.29
LTBR-203ENST00000441074 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 LGALS16A8MUM7 142 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 UFL1O94874 794 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 PRLRP16471 622 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 TNFRSF8P28908 595 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 NAP1L1P55209 391 aaKnown RBP13.22□□□□□ -0.29
LTBR-203ENST00000441074 MECOMQ03112 1051 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 NNTQ13423 1086 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
LTBR-203ENST00000441074 KDM7AQ6ZMT4 941 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 TSEN2Q8NCE0 465 aaKnown RBP13.22□□□□□ -0.29
LTBR-203ENST00000441074 HDAC7Q8WUI4 952 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 ANKRD2Q9GZV1 360 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 POLLQ9UGP5 575 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 XDHP47989 1333 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 IPO7O95373 1038 aaKnown RBP13.22□□□□□ -0.29
LTBR-203ENST00000441074 PARP1P09874 1014 aaKnown RBP13.22□□□□□ -0.29
LTBR-203ENST00000441074 APBA1Q02410 837 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 ZNF658Q5TYW1 1059 aaPredicted RBP13.22□□□□□ -0.29
LTBR-203ENST00000441074 ZNF654Q8IZM8 581 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 ZNF507Q8TCN5 953 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
LTBR-203ENST00000441074 PYM1Q9BRP8 204 aaKnown RBP13.22□□□□□ -0.29
LTBR-203ENST00000441074 RIMBP2O15034 1052 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.29
LTBR-203ENST00000441074 CLSTN1O94985 981 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 LSP1P33241 339 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 ACTN3Q08043 901 aaPredicted RBP13.21□□□□□ -0.29
LTBR-203ENST00000441074 RRP12Q5JTH9 1297 aaKnown RBP13.21□□□□□ -0.29
LTBR-203ENST00000441074 NAA35Q5VZE5 725 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms