RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 SYNGAP1Q96PV0 1343 aa23.38■■□□□ 1.33
TSSC4-206ENST00000440813 SNAI1O95863 264 aaPredicted RBP23.38■■□□□ 1.33
TSSC4-206ENST00000440813 CFBP00751 764 aa23.38■■□□□ 1.33
TSSC4-206ENST00000440813 PDIA3P30101 505 aaKnown RBP23.38■■□□□ 1.33
TSSC4-206ENST00000440813 ARMCX2Q7L311 632 aa23.38■■□□□ 1.33
TSSC4-206ENST00000440813 SHISA4Q96DD7 197 aa23.38■■□□□ 1.33
TSSC4-206ENST00000440813 IL17RAQ96F46 866 aa23.38■■□□□ 1.33
TSSC4-206ENST00000440813 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.38■■□□□ 1.33
TSSC4-206ENST00000440813 DDX49Q9Y6V7 483 aaKnown RBP23.38■■□□□ 1.33
TSSC4-206ENST00000440813 LCTP09848 1927 aa23.37■■□□□ 1.33
TSSC4-206ENST00000440813 CNTNAP5Q8WYK1 1306 aa23.37■■□□□ 1.33
TSSC4-206ENST00000440813 CCDC196A0A1B0GTZ2 297 aa23.37■■□□□ 1.33
TSSC4-206ENST00000440813 OPLAHO14841 1288 aa23.37■■□□□ 1.33
TSSC4-206ENST00000440813 EVCP57679 992 aa23.37■■□□□ 1.33
TSSC4-206ENST00000440813 CCT2P78371 535 aaKnown RBP23.37■■□□□ 1.33
TSSC4-206ENST00000440813 ADD3Q9UEY8 706 aaKnown RBP23.37■■□□□ 1.33
TSSC4-206ENST00000440813 MCM3APO60318 1980 aa23.37■■□□□ 1.33
TSSC4-206ENST00000440813 ASB14A6NK59 587 aa23.36■■□□□ 1.33
TSSC4-206ENST00000440813 FUT2Q10981 343 aa23.36■■□□□ 1.33
TSSC4-206ENST00000440813 PPP2R5BQ15173 497 aa23.36■■□□□ 1.33
TSSC4-206ENST00000440813 DDX20Q9UHI6 824 aaKnown RBP23.36■■□□□ 1.33
TSSC4-206ENST00000440813 NRBP1Q9UHY1 535 aa23.36■■□□□ 1.33
TSSC4-206ENST00000440813 ZHX1Q9UKY1 873 aaPredicted RBP23.36■■□□□ 1.33
TSSC4-206ENST00000440813 ZNF865P0CJ78 1059 aaPredicted RBP23.35■■□□□ 1.33
TSSC4-206ENST00000440813 ALDH5A1P51649 535 aaPredicted RBP23.35■■□□□ 1.33
TSSC4-206ENST00000440813 ANO1Q5XXA6 986 aa23.35■■□□□ 1.33
TSSC4-206ENST00000440813 LHX8Q68G74 356 aa23.35■■□□□ 1.33
TSSC4-206ENST00000440813 SYTL5Q8TDW5 730 aaPredicted RBP23.35■■□□□ 1.33
TSSC4-206ENST00000440813 C22orf23Q9BZE7 217 aa23.35■■□□□ 1.33
TSSC4-206ENST00000440813 MAF1Q9H063 256 aa23.35■■□□□ 1.33
TSSC4-206ENST00000440813 CRISPLD2Q9H0B8 497 aa23.35■■□□□ 1.33
TSSC4-206ENST00000440813 NCOA5Q9HCD5 579 aaKnown RBP23.35■■□□□ 1.33
TSSC4-206ENST00000440813 COL20A1Q9P218 1284 aa23.35■■□□□ 1.33
TSSC4-206ENST00000440813 V9GY48 417 aaPredicted RBP23.35■■□□□ 1.33
TSSC4-206ENST00000440813 SEPT4O43236 478 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 HOXA13P31271 388 aaPredicted RBP23.34■■□□□ 1.33
TSSC4-206ENST00000440813 RGS19P49795 217 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 NEK4P51957 841 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 STK3Q13188 491 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 ACVR2BQ13705 512 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 ZNF274Q96GC6 653 aaPredicted RBP23.34■■□□□ 1.33
TSSC4-206ENST00000440813 TAAR1Q96RJ0 339 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 ABHD16BQ9H3Z7 469 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 NID2Q14112 1375 aa23.34■■□□□ 1.33
TSSC4-206ENST00000440813 MSCO60682 206 aa23.33■■□□□ 1.33
TSSC4-206ENST00000440813 HSD17B4P51659 736 aa23.33■■□□□ 1.33
TSSC4-206ENST00000440813 AK2P54819 239 aa23.33■■□□□ 1.33
TSSC4-206ENST00000440813 EEPD1Q7L9B9 569 aa23.33■■□□□ 1.33
TSSC4-206ENST00000440813 HEATR3Q7Z4Q2 680 aa23.33■■□□□ 1.33
TSSC4-206ENST00000440813 DNERQ8NFT8 737 aa23.33■■□□□ 1.33
TSSC4-206ENST00000440813 GPKOWQ92917 476 aaPredicted RBP eCLIP23.33■■□□□ 1.33
TSSC4-206ENST00000440813 ALDH8A1Q9H2A2 487 aaPredicted RBP23.33■■□□□ 1.33
TSSC4-206ENST00000440813 GCOM1H8Y6P7 765 aaPredicted RBP23.32■■□□□ 1.32
TSSC4-206ENST00000440813 PPFIA3O75145 1194 aa23.32■■□□□ 1.32
TSSC4-206ENST00000440813 POLR2MP0CAP2 368 aa23.32■■□□□ 1.32
TSSC4-206ENST00000440813 NOL8Q76FK4 1167 aaKnown RBP23.32■■□□□ 1.32
TSSC4-206ENST00000440813 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
TSSC4-206ENST00000440813 OGDHLQ9ULD0 1010 aa23.32■■□□□ 1.32
TSSC4-206ENST00000440813 GHRHRQ02643 423 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 ANKRD1Q15327 319 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 MORC4Q8TE76 937 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 PHKBQ93100 1093 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 RMDN3Q96TC7 470 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 KATNBL1Q9H079 304 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 MAP3K20Q9NYL2 800 aaKnown RBP23.31■■□□□ 1.32
TSSC4-206ENST00000440813 FAM184BQ9ULE4 1060 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 TPCN1Q9ULQ1 816 aa23.31■■□□□ 1.32
TSSC4-206ENST00000440813 AKR1A1P14550 325 aa23.3■■□□□ 1.32
TSSC4-206ENST00000440813 PDE4DQ08499 809 aa23.3■■□□□ 1.32
TSSC4-206ENST00000440813 CCDC144BQ3MJ40 725 aa23.3■■□□□ 1.32
TSSC4-206ENST00000440813 ARHGEF16Q5VV41 709 aa23.3■■□□□ 1.32
TSSC4-206ENST00000440813 WWC2Q6AWC2 1192 aa23.3■■□□□ 1.32
TSSC4-206ENST00000440813 FCHSD1Q86WN1 690 aa23.3■■□□□ 1.32
TSSC4-206ENST00000440813 FBXO16Q8IX29 292 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-206ENST00000440813 SAMD3Q8N6K7 520 aa23.3■■□□□ 1.32
TSSC4-206ENST00000440813 NSUN6Q8TEA1 469 aaKnown RBP23.3■■□□□ 1.32
TSSC4-206ENST00000440813 LENG1Q96BZ8 264 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-206ENST00000440813 MPHOSPH6Q99547 160 aaKnown RBP23.3■■□□□ 1.32
TSSC4-206ENST00000440813 LOC102724159A0A0B4J2E5 919 aa23.29■■□□□ 1.32
TSSC4-206ENST00000440813 B4DLN1 442 aa23.29■■□□□ 1.32
TSSC4-206ENST00000440813 FARP2O94887 1054 aaPredicted RBP23.29■■□□□ 1.32
TSSC4-206ENST00000440813 MYCNP04198 464 aaPredicted RBP23.29■■□□□ 1.32
TSSC4-206ENST00000440813 RARBP10826 455 aa23.29■■□□□ 1.32
TSSC4-206ENST00000440813 EIF2AK2P19525 551 aaKnown RBP23.29■■□□□ 1.32
TSSC4-206ENST00000440813 RBM25P49756 843 aaKnown RBP23.29■■□□□ 1.32
TSSC4-206ENST00000440813 MRPL12P52815 198 aaKnown RBP23.29■■□□□ 1.32
TSSC4-206ENST00000440813 PWP2Q15269 919 aaKnown RBP23.29■■□□□ 1.32
TSSC4-206ENST00000440813 NTRK3Q16288 839 aa23.29■■□□□ 1.32
TSSC4-206ENST00000440813 KIF2CQ99661 725 aa23.29■■□□□ 1.32
TSSC4-206ENST00000440813 SLKQ9H2G2 1235 aaPredicted RBP23.29■■□□□ 1.32
TSSC4-206ENST00000440813 CPLX1O14810 134 aa23.28■■□□□ 1.32
TSSC4-206ENST00000440813 IFNAR1P17181 557 aa23.28■■□□□ 1.32
TSSC4-206ENST00000440813 CAPN2P17655 700 aa23.28■■□□□ 1.32
TSSC4-206ENST00000440813 EDNRBP24530 442 aa23.28■■□□□ 1.32
TSSC4-206ENST00000440813 NAPAP54920 295 aa23.28■■□□□ 1.32
TSSC4-206ENST00000440813 AKAP17AQ02040 695 aaKnown RBP23.28■■□□□ 1.32
TSSC4-206ENST00000440813 MLLT1Q03111 559 aaPredicted RBP23.28■■□□□ 1.32
TSSC4-206ENST00000440813 USP17L6PQ6QN14 398 aa23.28■■□□□ 1.32
TSSC4-206ENST00000440813 SMARCC2Q8TAQ2 1214 aa23.28■■□□□ 1.32
TSSC4-206ENST00000440813 CUL5Q93034 780 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms