RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 PPP1R9AQ9ULJ8 1098 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
SMPD4P2-201ENST00000440167 TRAF5O00463 557 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 SLC37A4O43826 429 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 NEMFO60524 1076 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 CFBP00751 764 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 ICAM1P05362 532 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 RBM43Q6ZSC3 357 aaKnown RBP13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 PDILTQ8N807 584 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 SYMPKQ92797 1274 aaKnown RBP13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 ATG4CQ96DT6 458 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 OTUD5Q96G74 571 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 RAVER2Q9HCJ3 691 aaKnown RBP13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 ABCB11O95342 1321 aa13.02□□□□□ -0.32
SMPD4P2-201ENST00000440167 AP3B2Q13367 1082 aa13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 LONRF3Q496Y0 759 aa13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 ARL6IP4Q66PJ3 421 aaKnown RBP13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 ANKRD13AQ8IZ07 590 aa13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 SDF4Q9BRK5 362 aa13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 MRPL11Q9Y3B7 192 aaKnown RBP13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 CTDP1Q9Y5B0 961 aaPredicted RBP13.02□□□□□ -0.33
SMPD4P2-201ENST00000440167 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 A0A087WWV3 80 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 A0A087X0B3 334 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 SPDYE3A6NKU9 549 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 CTAGE5O15320 804 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 OR52Z1P0C646 297 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 ALAS1P13196 640 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 TYRO3Q06418 890 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 TRAF1Q13077 416 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 SH3D19Q5HYK7 790 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 DTHD1Q6ZMT9 781 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 FCHSD1Q86WN1 690 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 RNF214Q8ND24 703 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
SMPD4P2-201ENST00000440167 LCTP09848 1927 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 LAD1O00515 517 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 IRF6O14896 467 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 ZBED4O75132 1171 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 CDC25AP30304 524 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 DSG3P32926 999 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 TREML2Q5T2D2 321 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 GADL1Q6ZQY3 521 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 CATSPERGQ6ZRH7 1159 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 ARMC9Q7Z3E5 817 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 FAM43AQ8N2R8 423 aa13□□□□□ -0.33
SMPD4P2-201ENST00000440167 ZNF526Q8TF50 670 aaPredicted RBP13□□□□□ -0.33
SMPD4P2-201ENST00000440167 PP2D1A8MPX8 630 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 PIK3CDO00329 1044 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 VWA5AO00534 786 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 NFIBO00712 420 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 FOXN1O15353 648 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 POLR2MP0CAP2 368 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 CCDC192P0DO97 292 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 LONP1P36776 959 aaKnown RBP12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 PRPHP41219 470 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 ORC2Q13416 577 aaPredicted RBP12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 CALCRLQ16602 461 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 SASS6Q6UVJ0 657 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 ERO1BQ86YB8 467 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 CNNM3Q8NE01 707 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 GJA10Q969M2 543 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 DHX58Q96C10 678 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 TIGD1Q96MW7 591 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 UIMC1Q96RL1 719 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 FOSP01100 380 aaPredicted RBP12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 TECP42680 631 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 TXKP42681 527 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 UBXN2AP68543 259 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 ARHGAP4P98171 946 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 PPATQ06203 517 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 PNOCQ13519 176 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 COG2Q14746 738 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 PPP4R3AQ6IN85 833 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 REPS2Q8NFH8 660 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 CRYGNQ8WXF5 182 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 CLEC4DQ8WXI8 215 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 NMRK2Q9NPI5 230 aa12.99□□□□□ -0.33
SMPD4P2-201ENST00000440167 ACTN4O43707 911 aaKnown RBP12.98□□□□□ -0.33
SMPD4P2-201ENST00000440167 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
SMPD4P2-201ENST00000440167 KCNA4P22459 653 aa12.98□□□□□ -0.33
SMPD4P2-201ENST00000440167 SREBF1P36956 1147 aa12.98□□□□□ -0.33
SMPD4P2-201ENST00000440167 USP11P51784 963 aa12.98□□□□□ -0.33
SMPD4P2-201ENST00000440167 MCTP2Q6DN12 878 aa12.98□□□□□ -0.33
SMPD4P2-201ENST00000440167 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
SMPD4P2-201ENST00000440167 KIAA1217Q5T5P2 1943 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms