RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	LRRFIP1	Q32MZ4	808 aa	Known RBP	19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	NSMF	Q6X4W1	530 aa		19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	KIAA1211	Q6ZU35	1233 aa		19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	RANBP17	Q9H2T7	1088 aa	Known RBP	19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	CCPG1	Q9ULG6	757 aa		19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	PCDHA11	Q9Y5I1	949 aa		19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	SLC4A7	Q9Y6M7	1214 aa		19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	BDP1	A6H8Y1	2624 aa		19.23	■□□□□ 0.67
LAMB1-205	ENST00000439976	TSPY2	A6NKD2	308 aa		19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	CYP2C9	P11712	490 aa		19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	PURA	Q00577	322 aa	Known RBP	19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	BAAT	Q14032	418 aa	Predicted RBP	19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	PPP2R2D	Q66LE6	453 aa		19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	TTBK2	Q6IQ55	1244 aa		19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	RPUSD2	Q8IZ73	545 aa	Known RBP	19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	UHRF1	Q96T88	793 aa	Predicted RBP	19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	TCF20	Q9UGU0	1960 aa	Known RBP	19.22	■□□□□ 0.67
LAMB1-205	ENST00000439976	RBM47	A0AV96	593 aa	Known RBP	19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	NFIB	O00712	420 aa		19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	FGR	P09769	529 aa		19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	ALDH5A1	P51649	535 aa	Predicted RBP	19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	PPP4R3B	Q5MIZ7	849 aa		19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	VPS53	Q5VIR6	699 aa		19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	BTNL9	Q6UXG8	535 aa		19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	FSD1	Q9BTV5	496 aa		19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	ANAPC4	Q9UJX5	808 aa		19.21	■□□□□ 0.67
LAMB1-205	ENST00000439976	BMP1	P13497	986 aa		19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	ATP2A2	P16615	1042 aa	Known RBP	19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	SLC16A2	P36021	539 aa		19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	DCAF4	Q8WV16	495 aa		19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	CLEC4D	Q8WXI8	215 aa		19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	NECAB3	Q96P71	396 aa	Predicted RBP	19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	WDR11	Q9BZH6	1224 aa		19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	MTMR7	Q9Y216	660 aa		19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	TNKS	O95271	1327 aa		19.2	■□□□□ 0.66
LAMB1-205	ENST00000439976	TET1	Q8NFU7	2136 aa		19.19	■□□□□ 0.66
LAMB1-205	ENST00000439976	ZBBX	A8MT70	800 aa		19.19	■□□□□ 0.66
LAMB1-205	ENST00000439976	ERC2	O15083	957 aa		19.19	■□□□□ 0.66
LAMB1-205	ENST00000439976	PFKM	P08237	780 aa		19.19	■□□□□ 0.66
LAMB1-205	ENST00000439976	SLC30A10	Q6XR72	485 aa		19.19	■□□□□ 0.66
LAMB1-205	ENST00000439976	SALL3	Q9BXA9	1300 aa		19.19	■□□□□ 0.66
LAMB1-205	ENST00000439976	LOC102724159	A0A0B4J2E5	919 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	EPOP	A6NHQ4	379 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	RFXAP	O00287	272 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	ORC4	O43929	436 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	ARHGEF15	O94989	841 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	SUPT20HL2	P0C7V6	817 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	POU3F3	P20264	500 aa	Predicted RBP	19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	TFF2	Q03403	129 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	PWP2	Q15269	919 aa	Known RBP	19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	CCDC96	Q2M329	555 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	SYDE2	Q5VT97	1194 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	DEFB128	Q7Z7B8	93 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	PPP1R13L	Q8WUF5	828 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	POLR3E	Q9NVU0	708 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	ADD3	Q9UEY8	706 aa	Known RBP	19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	PCDHB15	Q9Y5E8	787 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	TANC1	Q9C0D5	1861 aa		19.18	■□□□□ 0.66
LAMB1-205	ENST00000439976	RANBP6	O60518	1105 aa	Known RBP	19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	CA3	P07451	260 aa		19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	MYL3	P08590	195 aa		19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	EDNRB	P24530	442 aa		19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	CPT1A	P50416	773 aa		19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	TMEM47	Q9BQJ4	181 aa		19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	MTG1	Q9BT17	334 aa	Predicted RBP	19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	MTCH2	Q9Y6C9	303 aa		19.17	■□□□□ 0.66
LAMB1-205	ENST00000439976	MX1	P20591	662 aa		19.16	■□□□□ 0.66
LAMB1-205	ENST00000439976	NBPF20	Q3BBV1	942 aa		19.16	■□□□□ 0.66
LAMB1-205	ENST00000439976	TMEM67	Q5HYA8	995 aa		19.16	■□□□□ 0.66
LAMB1-205	ENST00000439976	MICALL1	Q8N3F8	863 aa		19.16	■□□□□ 0.66
LAMB1-205	ENST00000439976	OR6J1	Q8NGC5	347 aa		19.16	■□□□□ 0.66
LAMB1-205	ENST00000439976	FRMPD2	Q68DX3	1309 aa	Predicted RBP	19.16	■□□□□ 0.66
LAMB1-205	ENST00000439976	PTPDC1	A2A3K4	754 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976	KCNQ1	P51787	676 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976	ALX1	Q15699	326 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976	KRT40	Q6A162	431 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976	COPS5	Q92905	334 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976	CERS4	Q9HA82	394 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976	GPCPD1	Q9NPB8	672 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976	PTPRS	Q13332	1948 aa		19.15	■□□□□ 0.66
LAMB1-205	ENST00000439976		A6NJR5	290 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	PITPNM1	O00562	1244 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	IQCF3	P0C7M6	154 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	PDHB	P11177	359 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	TOP1	P11387	765 aa	Known RBP	19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	CALML3	P27482	149 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	RFC2	P35250	354 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	RPS6	P62753	249 aa	Known RBP	19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	NFRKB	Q6P4R8	1299 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	RNF207	Q6ZRF8	634 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	CTAGE1	Q96RT6	745 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	TSPYL2	Q9H2G4	693 aa	Predicted RBP	19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	TCP11L1	Q9NUJ3	509 aa		19.14	■□□□□ 0.65
LAMB1-205	ENST00000439976	TRIP12	Q14669	1992 aa	Predicted RBP	19.13	■□□□□ 0.65
LAMB1-205	ENST00000439976	NKRF	O15226	690 aa	Known RBP eCLIP	19.13	■□□□□ 0.65
LAMB1-205	ENST00000439976	ARIH2	O95376	493 aa		19.13	■□□□□ 0.65
LAMB1-205	ENST00000439976	FGA	P02671	866 aa		19.13	■□□□□ 0.65
LAMB1-205	ENST00000439976	TAP1	Q03518	808 aa		19.13	■□□□□ 0.65
LAMB1-205	ENST00000439976	GPNMB	Q14956	572 aa		19.13	■□□□□ 0.65
LAMB1-205	ENST00000439976	PPP2R5B	Q15173	497 aa		19.13	■□□□□ 0.65

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