RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 ZSWIM5Q9P217 1185 aa18.79■□□□□ 0.6
ITGB1-207ENST00000439974 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
ITGB1-207ENST00000439974 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
ITGB1-207ENST00000439974 E7EWF7 191 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 NFIBO00712 420 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 SLC27A2O14975 620 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 CABYRO75952 493 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 TIMP1P01033 207 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 SNHG28P0DPA3 235 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 SMPD1P17405 629 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 BAATQ14032 418 aaPredicted RBP18.78■□□□□ 0.6
ITGB1-207ENST00000439974 IQSEC1Q6DN90 963 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 EEPD1Q7L9B9 569 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 PURBQ96QR8 312 aaKnown RBP18.78■□□□□ 0.6
ITGB1-207ENST00000439974 AP5M1Q9H0R1 490 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 PDGFCQ9NRA1 345 aa18.78■□□□□ 0.6
ITGB1-207ENST00000439974 WDR19Q8NEZ3 1342 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 LOC102724159A0A0B4J2E5 919 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 TLR3O15455 904 aaKnown RBP18.77■□□□□ 0.6
ITGB1-207ENST00000439974 ZEB2O60315 1214 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 ALDH5A1P51649 535 aaPredicted RBP18.77■□□□□ 0.6
ITGB1-207ENST00000439974 PWP2Q15269 919 aaKnown RBP18.77■□□□□ 0.6
ITGB1-207ENST00000439974 FSCN1Q16658 493 aaKnown RBP18.77■□□□□ 0.6
ITGB1-207ENST00000439974 CREB3L3Q68CJ9 461 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 DGKHQ86XP1 1220 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 FAM126BQ8IXS8 530 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 KRT23Q9C075 422 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 Q9Y3F1 56 aa18.77■□□□□ 0.6
ITGB1-207ENST00000439974 PTPDC1A2A3K4 754 aa18.76■□□□□ 0.59
ITGB1-207ENST00000439974 DYNC1LI2O43237 492 aaPredicted RBP18.76■□□□□ 0.59
ITGB1-207ENST00000439974 CCDC178Q5BJE1 867 aa18.76■□□□□ 0.59
ITGB1-207ENST00000439974 GPATCH4Q5T3I0 446 aaKnown RBP18.76■□□□□ 0.59
ITGB1-207ENST00000439974 MFSD5Q6N075 450 aa18.76■□□□□ 0.59
ITGB1-207ENST00000439974 CXCL17Q6UXB2 119 aa18.76■□□□□ 0.59
ITGB1-207ENST00000439974 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
ITGB1-207ENST00000439974 CLEC4DQ8WXI8 215 aa18.76■□□□□ 0.59
ITGB1-207ENST00000439974 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
ITGB1-207ENST00000439974 TNKSO95271 1327 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 CALML3P27482 149 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 TRDNQ13061 729 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 PPIGQ13427 754 aaKnown RBP eCLIP18.75■□□□□ 0.59
ITGB1-207ENST00000439974 SLC30A10Q6XR72 485 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 RNF207Q6ZRF8 634 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 ENAHQ8N8S7 591 aaPredicted RBP18.75■□□□□ 0.59
ITGB1-207ENST00000439974 SLC43A3Q8NBI5 491 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 CNNM2Q9H8M5 875 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 SENP2Q9HC62 589 aa18.75■□□□□ 0.59
ITGB1-207ENST00000439974 CD4P01730 458 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 PTGS1P23219 599 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 NECTIN1Q15223 517 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 DUSP28Q4G0W2 176 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 RALYLQ86SE5 291 aaKnown RBP18.74■□□□□ 0.59
ITGB1-207ENST00000439974 TMEM199Q8N511 208 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 PNMA1Q8ND90 353 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 UBAC1Q9BSL1 405 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 SEZ6LQ9BYH1 1024 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 SEMA6BQ9H3T3 888 aa18.74■□□□□ 0.59
ITGB1-207ENST00000439974 CDH23Q9H251 3354 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 GOLGA8HP0CJ92 632 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 ANTXR2P58335 489 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 RPS6P62753 249 aaKnown RBP18.73■□□□□ 0.59
ITGB1-207ENST00000439974 ITGA7Q13683 1181 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 TMEM63BQ5T3F8 832 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 NCOA7Q8NI08 942 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 MPHOSPH6Q99547 160 aaKnown RBP18.73■□□□□ 0.59
ITGB1-207ENST00000439974 CDX2Q99626 313 aaPredicted RBP18.73■□□□□ 0.59
ITGB1-207ENST00000439974 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.73■□□□□ 0.59
ITGB1-207ENST00000439974 WDR11Q9BZH6 1224 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 KAT14Q9H8E8 782 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 GPHNQ9NQX3 736 aaPredicted RBP18.73■□□□□ 0.59
ITGB1-207ENST00000439974 A0A0C4DFX4 3053 aa18.73■□□□□ 0.59
ITGB1-207ENST00000439974 TMEM265A0A087WTH1 108 aa18.72■□□□□ 0.59
ITGB1-207ENST00000439974 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-207ENST00000439974 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-207ENST00000439974 DLL1O00548 723 aa18.72■□□□□ 0.59
ITGB1-207ENST00000439974 MB21D2Q8IYB1 491 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-207ENST00000439974 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
ITGB1-207ENST00000439974 DNERQ8NFT8 737 aa18.72■□□□□ 0.59
ITGB1-207ENST00000439974 ANKS1AQ92625 1134 aa18.72■□□□□ 0.59
ITGB1-207ENST00000439974 UBA5Q9GZZ9 404 aa18.72■□□□□ 0.59
ITGB1-207ENST00000439974 TTYH1Q9H313 450 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-207ENST00000439974 CPVLQ9H3G5 476 aa18.72■□□□□ 0.59
ITGB1-207ENST00000439974 RBM47A0AV96 593 aaKnown RBP18.71■□□□□ 0.59
ITGB1-207ENST00000439974 IFIT3O14879 490 aaKnown RBP18.71■□□□□ 0.59
ITGB1-207ENST00000439974 CSF2RAP15509 400 aa18.71■□□□□ 0.59
ITGB1-207ENST00000439974 PDE4DQ08499 809 aa18.71■□□□□ 0.59
ITGB1-207ENST00000439974 SEC23AQ15436 765 aa18.71■□□□□ 0.59
ITGB1-207ENST00000439974 USH1GQ495M9 461 aa18.71■□□□□ 0.59
ITGB1-207ENST00000439974 LRRC2Q9BYS8 371 aa18.71■□□□□ 0.59
ITGB1-207ENST00000439974 GRIN2DO15399 1336 aa18.71■□□□□ 0.59
ITGB1-207ENST00000439974 EDNRBP24530 442 aa18.7■□□□□ 0.58
ITGB1-207ENST00000439974 CPT1AP50416 773 aa18.7■□□□□ 0.58
ITGB1-207ENST00000439974 CDC37Q16543 378 aaPredicted RBP18.7■□□□□ 0.58
ITGB1-207ENST00000439974 ASPRV1Q53RT3 343 aa18.7■□□□□ 0.58
ITGB1-207ENST00000439974 TMEM240Q5SV17 173 aa18.7■□□□□ 0.58
ITGB1-207ENST00000439974 IFIT1BQ5T764 474 aaKnown RBP18.7■□□□□ 0.58
ITGB1-207ENST00000439974 PSRC1Q6PGN9 363 aaPredicted RBP18.7■□□□□ 0.58
ITGB1-207ENST00000439974 C16orf59Q7L2K0 433 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms