RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 KCNK3O14649 394 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 MYZAPP0CAP1 466 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 CTNNA1P35221 906 aaKnown RBP10.02□□□□□ -0.81
COPB1-202ENST00000439561 NAA25Q14CX7 972 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 ALX1Q15699 326 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 PKN1Q16512 942 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 SPTY2D1Q68D10 685 aaPredicted RBP10.02□□□□□ -0.81
COPB1-202ENST00000439561 EMBQ6PCB8 327 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 TMTC3Q6ZXV5 915 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 NELFCDQ8IXH7 590 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 BANK1Q8NDB2 785 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 SELENOSQ9BQE4 189 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 THAP9Q9H5L6 903 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 MEGF6O75095 1541 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 ARID4AP29374 1257 aaPredicted RBP10.02□□□□□ -0.81
COPB1-202ENST00000439561 TCERG1LQ5VWI1 586 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 MAP3K15Q6ZN16 1313 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 SH3RF1Q7Z6J0 888 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 OR2W6PQ8NHA6 318 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 TBC1D31Q96DN5 1066 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 ABCC12Q96J65 1359 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 MTRQ99707 1265 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 BAIAP2L1Q9UHR4 511 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 ZBTB1Q9Y2K1 713 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 MROH5Q6ZUA9 1318 aa10.02□□□□□ -0.81
COPB1-202ENST00000439561 MEFVO15553 781 aaPredicted RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 CCNE1P24864 410 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 LSP1P33241 339 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 TNNC1P63316 161 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 STK4Q13043 487 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 ALS2CLQ60I27 953 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 ADAT2Q7Z6V5 191 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 ARFGAP2Q8N6H7 521 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 N4BP2L2Q92802 583 aaPredicted RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 SPAG5Q96R06 1193 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 DNAJC7Q99615 494 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 TCRBV5S4A2TA0A5A2 114 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 FGFR1OPO95684 399 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 SRGNP10124 158 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 CYP2D6P10635 497 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 EZRP15311 586 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 SLC1A4P43007 532 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 HDLBPQ00341 1268 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 PPP2R5BQ15173 497 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 SLC9C1Q4G0N8 1177 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 MSL1Q68DK7 614 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 PNMA8AQ86V59 439 aaPredicted RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 ZNF444Q8N0Y2 327 aaPredicted RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 PLAAQ9Y263 795 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 A0A1W2PQC6 194 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 PALMO75781 387 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 CLNS1AP54105 237 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 POLR2FP61218 127 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 TFAP4Q01664 338 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 KRT71Q3SY84 523 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 CCDC152Q4G0S7 254 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 TTMPQ5BVD1 217 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 NAA35Q5VZE5 725 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 CNNM4Q6P4Q7 775 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 DZIP1Q86YF9 867 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 CCDC155Q8N6L0 562 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 AP1M1Q9BXS5 423 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 CRNKL1Q9BZJ0 848 aaKnown RBP10.01□□□□□ -0.81
COPB1-202ENST00000439561 TMEM60Q9H2L4 133 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 DPH5Q9H2P9 285 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 NDST4Q9H3R1 872 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 YY1AP1Q9H869 796 aa10.01□□□□□ -0.81
COPB1-202ENST00000439561 ERVV-2B6SEH9 535 aa10□□□□□ -0.81
COPB1-202ENST00000439561 CSF1RP07333 972 aa10□□□□□ -0.81
COPB1-202ENST00000439561 FAM153BP0C7A2 387 aa10□□□□□ -0.81
COPB1-202ENST00000439561 FAM153CQ494X1 144 aa10□□□□□ -0.81
COPB1-202ENST00000439561 SV2BQ7L1I2 683 aa10□□□□□ -0.81
COPB1-202ENST00000439561 UHMK1Q8TAS1 419 aaKnown RBP10□□□□□ -0.81
COPB1-202ENST00000439561 ZNF473Q8WTR7 871 aaKnown RBP10□□□□□ -0.81
COPB1-202ENST00000439561 GOLPH3Q9H4A6 298 aa10□□□□□ -0.81
COPB1-202ENST00000439561 SEC63Q9UGP8 760 aaKnown RBP10□□□□□ -0.81
COPB1-202ENST00000439561 FAM153AQ9UHL3 310 aa10□□□□□ -0.81
COPB1-202ENST00000439561 ODF2LQ9ULJ1 636 aa10□□□□□ -0.81
COPB1-202ENST00000439561 PDS5AQ29RF7 1337 aaKnown RBP10□□□□□ -0.81
COPB1-202ENST00000439561 LRRC10BA6NIK2 292 aa10□□□□□ -0.81
COPB1-202ENST00000439561 TSPY3P0CV98 308 aa10□□□□□ -0.81
COPB1-202ENST00000439561 TSPY8P0CW00 308 aa10□□□□□ -0.81
COPB1-202ENST00000439561 NLRP14Q86W24 1093 aa10□□□□□ -0.81
COPB1-202ENST00000439561 IRF2BP1Q8IU81 584 aa10□□□□□ -0.81
COPB1-202ENST00000439561 CREG2Q8IUH2 290 aa10□□□□□ -0.81
COPB1-202ENST00000439561 RETREG2Q8NC44 543 aa10□□□□□ -0.81
COPB1-202ENST00000439561 AENQ8WTP8 325 aaKnown RBP10□□□□□ -0.81
COPB1-202ENST00000439561 TBC1D5Q92609 795 aa10□□□□□ -0.81
COPB1-202ENST00000439561 DHTKD1Q96HY7 919 aaPredicted RBP10□□□□□ -0.81
COPB1-202ENST00000439561 CCT8L2Q96SF2 557 aa10□□□□□ -0.81
COPB1-202ENST00000439561 LSM14BQ9BX40 385 aaKnown RBP10□□□□□ -0.81
COPB1-202ENST00000439561 SH2D4AQ9H788 454 aa10□□□□□ -0.81
COPB1-202ENST00000439561 TFCP2L1Q9NZI6 479 aa10□□□□□ -0.81
COPB1-202ENST00000439561 NIP7Q9Y221 180 aaKnown RBP eCLIP10□□□□□ -0.81
COPB1-202ENST00000439561 PPP1R37O75864 691 aa10□□□□□ -0.81
COPB1-202ENST00000439561 GLI1P08151 1106 aa10□□□□□ -0.81
COPB1-202ENST00000439561 TMOD1P28289 359 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms