RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 KCNJ18B7U540 433 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 IL6STP40189 918 aaPredicted RBP17.44■□□□□ 0.38
DHFR-201ENST00000439211 RPS6KA3P51812 740 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 KCNQ4P56696 695 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 SLC8A3P57103 927 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 KCNJ12Q14500 433 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 CYP26C1Q6V0L0 522 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 ZNF444Q8N0Y2 327 aaPredicted RBP17.44■□□□□ 0.38
DHFR-201ENST00000439211 ARL8AQ96BM9 186 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 MMS19Q96T76 1030 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 PSMA7O14818 248 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 NR1D1P20393 614 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 SLC7A5Q01650 507 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 LAMB3Q13751 1172 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 TRIM58Q8NG06 486 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 MACROD2A1Z1Q3 448 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 ACTN4O43707 911 aaKnown RBP17.44■□□□□ 0.38
DHFR-201ENST00000439211 DDB1Q16531 1140 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 CCDC63Q8NA47 563 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 HOOK2Q96ED9 719 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 EPN3Q9H201 632 aa17.44■□□□□ 0.38
DHFR-201ENST00000439211 CHCHD3Q9NX63 227 aaKnown RBP17.44■□□□□ 0.38
DHFR-201ENST00000439211 TCRBV5S4A2TA0A5A2 114 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 BACH1O14867 736 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 PCK1P35558 622 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 PRPHP41219 470 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 FUKQ8N0W3 1084 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 C3orf20Q8ND61 904 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 TCP11L1Q9NUJ3 509 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 GDAQ9Y2T3 454 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 CUL4BQ13620 913 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 NR1I3Q14994 352 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 KRT31Q15323 416 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 TRIM4Q9C037 500 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 MFAP3LO75121 409 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 PPP1R37O75864 691 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
DHFR-201ENST00000439211 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 ZNF579Q8NAF0 562 aaKnown RBP17.43■□□□□ 0.38
DHFR-201ENST00000439211 STAMBPL1Q96FJ0 436 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 RPGRIP1Q96KN7 1286 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 ANKIB1Q9P2G1 1089 aa17.43■□□□□ 0.38
DHFR-201ENST00000439211 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 CD44P16070 742 aaKnown RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 FXR1P51114 621 aaKnown RBP eCLIP17.42■□□□□ 0.38
DHFR-201ENST00000439211 GUCY2FP51841 1108 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 COPB1P53618 953 aaKnown RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 ASIC1P78348 528 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 EARS2Q5JPH6 523 aaKnown RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 KRT86O43790 486 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 KRT14P02533 472 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 GRIK3Q13003 919 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 SPA17Q15506 151 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 PANX2Q96RD6 677 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 OSBPL9Q96SU4 736 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 SLIT3O75094 1523 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 SHOX2O60902 331 aaPredicted RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 SCG2P13521 617 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 FNTAP49354 379 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 DBN1Q16643 649 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 CCNI2Q6ZMN8 369 aaPredicted RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 TBC1D1Q86TI0 1168 aaPredicted RBP17.42■□□□□ 0.38
DHFR-201ENST00000439211 TRIM74Q86UV6 250 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 TRIM73Q86UV7 250 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 CCDC170Q8IYT3 715 aa17.42■□□□□ 0.38
DHFR-201ENST00000439211 LRRD1A4D1F6 860 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 DIAPH2O60879 1101 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 POLE2P56282 527 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 PARP10Q53GL7 1025 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 ZNF512BQ96KM6 892 aaPredicted RBP17.41■□□□□ 0.38
DHFR-201ENST00000439211 TRPC6Q9Y210 931 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 CALML3P27482 149 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 ACCSLQ4AC99 568 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 B4GALNT2Q8NHY0 566 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 NOD2Q9HC29 1040 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 MRC1P22897 1456 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 A0A1B0GTH6 734 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 RPN1P04843 607 aaKnown RBP17.41■□□□□ 0.38
DHFR-201ENST00000439211 TFAP4Q01664 338 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 APBA1Q02410 837 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 LETM2Q2VYF4 491 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 VGLL2Q8N8G2 317 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 ANKS4BQ8N8V4 417 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 RNPC3Q96LT9 517 aaKnown RBP17.41■□□□□ 0.38
DHFR-201ENST00000439211 PYM1Q9BRP8 204 aaKnown RBP17.41■□□□□ 0.38
DHFR-201ENST00000439211 NOP53Q9NZM5 478 aaKnown RBP17.41■□□□□ 0.38
DHFR-201ENST00000439211 TRIM49BA6NDI0 452 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 ICA1Q05084 483 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 WLSQ5T9L3 541 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 GKAP1Q5VSY0 366 aaPredicted RBP17.41■□□□□ 0.38
DHFR-201ENST00000439211 CSGALNACT2Q8N6G5 542 aa17.41■□□□□ 0.38
DHFR-201ENST00000439211 WTIPA6NIX2 430 aaPredicted RBP17.4■□□□□ 0.38
DHFR-201ENST00000439211 OPLAHO14841 1288 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 INF2Q27J81 1249 aa17.4■□□□□ 0.38
DHFR-201ENST00000439211 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms