RNA–Protein interactions for RNA: ENST00000438828.3

CARF-213, Transcript of calcium responsive transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARF, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-213ENST00000438828 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.55□□□□□ -0.24
CARF-213ENST00000438828 WDR19Q8NEZ3 1342 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 PLEKHG1Q9ULL1 1385 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 TECPR2O15040 1411 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 TRAF5O00463 557 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 CALRP27797 417 aaKnown RBP13.55□□□□□ -0.24
CARF-213ENST00000438828 PUM3Q15397 648 aaKnown RBP13.55□□□□□ -0.24
CARF-213ENST00000438828 WDR59Q6PJI9 974 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 DDX42Q86XP3 938 aaKnown RBP eCLIP13.55□□□□□ -0.24
CARF-213ENST00000438828 FBXL16Q8N461 479 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 CALML4Q96GE6 196 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 FCER1AP12319 257 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 TXKP42681 527 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 GKAP1Q5VSY0 366 aaPredicted RBP13.55□□□□□ -0.24
CARF-213ENST00000438828 P2RX5Q93086 422 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 GOLPH3Q9H4A6 298 aa13.55□□□□□ -0.24
CARF-213ENST00000438828 LRRC53A6NM62 1247 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 USP17L12C9JPN9 530 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 USP17L21D6R901 530 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 STARD3NLO95772 234 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 GLI1P08151 1106 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 SLC1A4P43007 532 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 MYCBPAPQ8TBZ2 947 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 AENQ8WTP8 325 aaKnown RBP13.54□□□□□ -0.24
CARF-213ENST00000438828 UBA5Q9GZZ9 404 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 PALMO75781 387 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 SCG2P13521 617 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
CARF-213ENST00000438828 FAM133BQ5BKY9 247 aaKnown RBP13.54□□□□□ -0.24
CARF-213ENST00000438828 SWT1Q5T5J6 900 aaKnown RBP13.54□□□□□ -0.24
CARF-213ENST00000438828 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 CABP7Q86V35 215 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 SPATS2Q86XZ4 545 aaKnown RBP13.54□□□□□ -0.24
CARF-213ENST00000438828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.54□□□□□ -0.24
CARF-213ENST00000438828 TSG101Q99816 390 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 STK38LQ9Y2H1 464 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 TUBGCP6Q96RT7 1819 aa13.54□□□□□ -0.24
CARF-213ENST00000438828 MDH1P40925 334 aaKnown RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 TECP42680 631 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 POLR2FP61218 127 aaKnown RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 SLC9C1Q4G0N8 1177 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 ENAHQ8N8S7 591 aaPredicted RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 LPIN2Q92539 896 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 ATP6V1G3Q96LB4 118 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 MKNK2Q9HBH9 465 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 DISC1Q9NRI5 854 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 GGT7Q9UJ14 662 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 PHF20L1A8MW92 1017 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 CCNT1O60563 726 aaKnown RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 CPP00450 1065 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 GNAT2P19087 354 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 DYNLL1P63167 89 aaKnown RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 AMPD3Q01432 767 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 PTGISQ16647 500 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 ANKRD40Q6AI12 368 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 CREG2Q8IUH2 290 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 MYO1EQ12965 1108 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 RPS6KA1Q15418 735 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 HAUS3Q68CZ6 603 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 ANKS4BQ8N8V4 417 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 MGARPQ8TDB4 240 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 ZKSCAN4Q969J2 545 aaPredicted RBP13.53□□□□□ -0.24
CARF-213ENST00000438828 DONSONQ9NYP3 566 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 ADAMTS1Q9UHI8 967 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
CARF-213ENST00000438828 CALML3P27482 149 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 KIF5BP33176 963 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 ATP2C1P98194 919 aaPredicted RBP13.52□□□□□ -0.24
CARF-213ENST00000438828 TRADDQ15628 312 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 DZIP3Q86Y13 1208 aaKnown RBP13.52□□□□□ -0.24
CARF-213ENST00000438828 BLIDQ8IZY5 108 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 CCDC155Q8N6L0 562 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 TBC1D5Q92609 795 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 DNAJC7Q99615 494 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 OVOS2A0A0G2JMS6 1433 aa13.52□□□□□ -0.24
CARF-213ENST00000438828 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.25
CARF-213ENST00000438828 KIF4AO95239 1232 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 PLCG1P19174 1290 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 PAX7P23759 505 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 CCDC25Q86WR0 208 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 CNPY4Q8N129 248 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 THAP9Q9H5L6 903 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 NAPAP54920 295 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 CTSWP56202 376 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 KLHL30Q0D2K2 578 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 STK4Q13043 487 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 LRRC45Q96CN5 670 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 NDST4Q9H3R1 872 aa13.52□□□□□ -0.25
CARF-213ENST00000438828 SH2D4AQ9H788 454 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms