RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ABI1Q8IZP0 508 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 TMEM52Q8NDY8 209 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 MYLIPQ8WY64 445 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 PTPRN2Q92932 1015 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 EXOC2Q96KP1 924 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 MRPL4Q9BYD3 311 aaKnown RBP5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 GPR27Q9NS67 375 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 FANCLQ9NW38 375 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 CLEC1BQ9P126 229 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 CTNND2Q9UQB3 1225 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 CADPSQ9ULU8 1353 aa5.54□□□□□ -1.52
LSM1P1-201ENST00000438629 ESYT3A0FGR9 886 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 AQP7O14520 342 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 PLD2O14939 933 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 NRDCO43847 1150 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 SMARCA5O60264 1052 aaPredicted RBP5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 LAPTM5Q13571 262 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 FNDC3BQ53EP0 1204 aaKnown RBP5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 ATG4DQ86TL0 474 aaPredicted RBP5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 SLCO6A1Q86UG4 719 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 FLAD1Q8NFF5 587 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 ASIC4Q96FT7 647 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 C1orf159Q96HA4 380 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 SLKQ9H2G2 1235 aaPredicted RBP5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 TMX1Q9H3N1 280 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 ADAMTS6Q9UKP5 1117 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 NPFFR2Q9Y5X5 522 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 TAF6LQ9Y6J9 622 aa5.53□□□□□ -1.52
LSM1P1-201ENST00000438629 A0A1W2PQJ5 194 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 RPL11P62913 178 aaKnown RBP5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 CYP4F3Q08477 520 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 PRSS53Q2L4Q9 553 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 PLEKHG4Q58EX7 1191 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 STYK1Q6J9G0 422 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 CPNE8Q86YQ8 564 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 IFNL3Q8IZI9 196 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 EBF1Q9UH73 591 aa5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 TIMM13Q9Y5L4 95 aaPredicted RBP5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 OAS3Q9Y6K5 1087 aaKnown RBP5.52□□□□□ -1.53
LSM1P1-201ENST00000438629 C7orf72A4D263 438 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 KCNQ2O43526 872 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 USP2O75604 605 aaPredicted RBP5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 RFPL3O75679 317 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 ASMTLO95671 621 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 ARL4AP40617 200 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 GPR85P60893 370 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 HSF5Q4G112 596 aaPredicted RBP5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 DENND5AQ6IQ26 1287 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 CBLL1Q75N03 491 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 ABHD4Q8TB40 342 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 JMJD8Q96S16 334 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 FEZ1Q99689 392 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 PHF20Q9BVI0 1012 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 KANSL2Q9H9L4 492 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 NCOA5Q9HCD5 579 aaKnown RBP5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 CRTAC1Q9NQ79 661 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 C19orf73Q9NVV2 129 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 ACSL6Q9UKU0 697 aa5.51□□□□□ -1.53
LSM1P1-201ENST00000438629 PNLIPP16233 465 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 CYP4F8P98187 520 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 LSAMPQ13449 338 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 NTRK3Q16288 839 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 TRIM61Q5EBN2 209 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 KIAA0907Q7Z7F0 614 aaPredicted RBP5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 NLGN1Q8N2Q7 840 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 Q8N3U1 123 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 RCBTB1Q8NDN9 531 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 USP33Q8TEY7 942 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 KIRREL1Q96J84 757 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 MAGEB10Q96LZ2 347 aaPredicted RBP5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 ALG1Q9BT22 464 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 PDLIM7Q9NR12 457 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 ADGRE2Q9UHX3 823 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 TMEFF2Q9UIK5 374 aaPredicted RBP5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 GPR160Q9UJ42 338 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 PLAAQ9Y263 795 aa5.5□□□□□ -1.53
LSM1P1-201ENST00000438629 H7BY64 318 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 C6orf222P0C671 652 aaPredicted RBP5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 PRKCAP17252 672 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 JUNBP17275 347 aaPredicted RBP5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 IRAK1P51617 712 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 ERVFC1P60507 584 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 KIZQ2M2Z5 673 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 NLRX1Q86UT6 975 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 CABP7Q86V35 215 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 CCDC103Q8IW40 242 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 LZTR1Q8N653 840 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 NUP43Q8NFH3 380 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 CHAMP1Q96JM3 812 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 SP110Q9HB58 689 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 IMPACTQ9P2X3 320 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 NDOR1Q9UHB4 597 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 SFMBT1Q9UHJ3 866 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 PCDHA2Q9Y5H9 948 aa5.49□□□□□ -1.53
LSM1P1-201ENST00000438629 BLACEA4D250 179 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 ARNTLO00327 626 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 PPP1R12AO14974 1030 aaPredicted RBP5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 GSTA4O15217 222 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms