RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 C6orf50Q9HD87 102 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 LRRC37A2A6NM11 1700 aa12.14□□□□□ -0.47
HLA-DMB-259ENST00000438510 SMCO2A6NFE2 343 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 GCOM1H8Y6P7 765 aaPredicted RBP12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 NFIBO00712 420 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 CFBP00751 764 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 GNRH1P01148 92 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 POLR2MP0CAP2 368 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 PTPREP23469 700 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 PSMC4P43686 418 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 ADCY7P51828 1080 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 NLRP5P59047 1200 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 GHRHRQ02643 423 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 POTEHQ6S545 545 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 NSMFQ6X4W1 530 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 RNF207Q6ZRF8 634 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 ZNF296Q8WUU4 475 aaPredicted RBP12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 PSTPIP2Q9H939 334 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 A1CFQ9NQ94 594 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
HLA-DMB-259ENST00000438510 SLC15A5A6NIM6 579 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 PIK3CDO00329 1044 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 OPLAHO14841 1288 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 DTNBO60941 627 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 PDIA4P13667 645 aaKnown RBP12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 HOXD10P28358 340 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 HSD17B4P51659 736 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 GRB14Q14449 540 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 SAFBQ15424 915 aaKnown RBP eCLIP12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 DAGLBQ8NCG7 672 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 CD99L2Q8TCZ2 262 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 PHF20Q9BVI0 1012 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 CYP39A1Q9NYL5 469 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 PCDHA4Q9UN74 947 aa12.12□□□□□ -0.47
HLA-DMB-259ENST00000438510 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 MCM3APO60318 1980 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 H3BQV1 296 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 MMP1P03956 469 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 ADORA2AP29274 412 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 KRT2P35908 639 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 RGS2P41220 211 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 FOSBP53539 338 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 RPS6P62753 249 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 AP3B2Q13367 1082 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 KRT40Q6A162 431 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 FBXO18Q8NFZ0 1043 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 MPHOSPH6Q99547 160 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-259ENST00000438510 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 MEIS2O14770 477 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 FOXN1O15353 648 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 PRMT2P55345 433 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 MORN1Q5T089 497 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 BLIDQ8IZY5 108 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 SHISA4Q96DD7 197 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 KCNJ14Q9UNX9 436 aa12.1□□□□□ -0.47
HLA-DMB-259ENST00000438510 DNAJC25-GNG10A0A024R161 153 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 B4DLN1 442 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 CTGFP29279 349 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 GUCY1B3Q02153 619 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 GNL2Q13823 731 aaKnown RBP12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 UBE2SQ16763 222 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 DNERQ8NFT8 737 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 SYTL5Q8TDW5 730 aaPredicted RBP12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 TBC1D5Q92609 795 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 APBA2Q99767 749 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 DIS3Q9Y2L1 958 aaKnown RBP12.09□□□□□ -0.47
HLA-DMB-259ENST00000438510 VPS37CA5D8V6 355 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 PGK2P07205 417 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms