RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 CLIC6Q96NY7 704 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 NUP88Q99567 741 aaPredicted RBP10.9□□□□□ -0.66
LINC00858-202ENST00000437892 NAP1L4Q99733 375 aaKnown RBP10.9□□□□□ -0.66
LINC00858-202ENST00000437892 RBSNQ9H1K0 784 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 RANBP17Q9H2T7 1088 aaKnown RBP10.9□□□□□ -0.66
LINC00858-202ENST00000437892 VAT1LQ9HCJ6 419 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 USP25Q9UHP3 1055 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 KCNH3Q9ULD8 1083 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 PRR12Q9ULL5 1215 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 PCDHA1Q9Y5I3 950 aa10.9□□□□□ -0.66
LINC00858-202ENST00000437892 SCN4AP35499 1836 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 PIK3CDO00329 1044 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 GCFC2P16383 781 aaKnown RBP10.89□□□□□ -0.67
LINC00858-202ENST00000437892 CAMK4Q16566 473 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 STX1AQ16623 288 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 INF2Q27J81 1249 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 KIAA1755Q5JYT7 1200 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 FAM83BQ5T0W9 1011 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 NBPF12Q5TAG4 269 aaPredicted RBP10.89□□□□□ -0.67
LINC00858-202ENST00000437892 KANK3Q6NY19 840 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 MOXD1Q6UVY6 613 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 USP50Q70EL3 339 aaPredicted RBP10.89□□□□□ -0.67
LINC00858-202ENST00000437892 FBXO11Q86XK2 927 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
LINC00858-202ENST00000437892 C12orf42Q96LP6 360 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 AK8Q96MA6 479 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 CSRNP2Q9H175 543 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 PSTPIP2Q9H939 334 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 AS3MTQ9HBK9 375 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 PNMA2Q9UL42 364 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 WDR90Q96KV7 1748 aa10.89□□□□□ -0.67
LINC00858-202ENST00000437892 GRIN3BO60391 1043 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 NEMFO60524 1076 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 DDNO94850 711 aaPredicted RBP10.88□□□□□ -0.67
LINC00858-202ENST00000437892 FOSP01100 380 aaPredicted RBP10.88□□□□□ -0.67
LINC00858-202ENST00000437892 FDX1P10109 184 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 ATP2B1P20020 1258 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 MCM7P33993 719 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 GHRHRQ02643 423 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 ZNF174Q15697 407 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 PPP4R3AQ6IN85 833 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 SASS6Q6UVJ0 657 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 KRBA2Q6ZNG9 492 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 SPICE1Q8N0Z3 855 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 FAM200AQ8TCP9 573 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 TBCKQ8TEA7 893 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 KLRG1Q96E93 195 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 CCDC34Q96HJ3 373 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 FEZ1Q99689 392 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 SDF4Q9BRK5 362 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
LINC00858-202ENST00000437892 MRVI1Q9Y6F6 885 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 PHIPQ8WWQ0 1821 aa10.88□□□□□ -0.67
LINC00858-202ENST00000437892 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 RAD21O60216 631 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 EVI5O60447 810 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 OR52Z1P0C646 297 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 PTPRAP18433 802 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 INPP5BP32019 993 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 GRIN1Q05586 938 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 IKQ13123 557 aaPredicted RBP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 TPRNQ4KMQ1 711 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 CKAP2LQ8IYA6 745 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 CRYGNQ8WXF5 182 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 SYMPKQ92797 1274 aaKnown RBP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 MBOAT7Q96N66 472 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 WRNIP1Q96S55 665 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 GLIS2Q9BZE0 524 aaPredicted RBP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 PICK1Q9NRD5 415 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 TUBE1Q9UJT0 475 aa10.87□□□□□ -0.67
LINC00858-202ENST00000437892 ARIH1Q9Y4X5 557 aaPredicted RBP10.87□□□□□ -0.67
LINC00858-202ENST00000437892 OTOFQ9HC10 1997 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 ABCB11O95342 1321 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 PARP14Q460N5 1801 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 RBBP6Q7Z6E9 1792 aaKnown RBP10.86□□□□□ -0.67
LINC00858-202ENST00000437892 CYP3A7-CYP3A51PA0A087WV96 503 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 VWA3AA6NCI4 1184 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 C19orf81C9J6K1 198 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 MEIS2O14770 477 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 OPLAHO14841 1288 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 VCAM1P19320 739 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 CYP3A7P24462 503 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 TXLNAP40222 546 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 USP11P51784 963 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 BACE1P56817 501 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 MDM2Q00987 491 aaPredicted RBP10.86□□□□□ -0.67
LINC00858-202ENST00000437892 NT5DC1Q5TFE4 455 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 JAKMIP3Q5VZ66 844 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 DTHD1Q6ZMT9 781 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 SULF1Q8IWU6 871 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 SAMD3Q8N6K7 520 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 PRPF38AQ8NAV1 312 aaKnown RBP10.86□□□□□ -0.67
LINC00858-202ENST00000437892 ZNF280CQ8ND82 737 aa10.86□□□□□ -0.67
LINC00858-202ENST00000437892 DCPSQ96C86 337 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms