RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 PDXDC1Q6P996 788 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 C14orf80Q86SX3 495 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 SNX32Q86XE0 403 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 TMEM151BQ8IW70 566 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 FAM20CQ8IXL6 584 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 CKAP2LQ8IYA6 745 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 TRMT2AQ8IZ69 625 aaKnown RBP7.15□□□□□ -1.26
MCF2-205ENST00000437564 TOR1AIP2Q8NFQ8 470 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 HELQQ8TDG4 1101 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 NCSTNQ92542 709 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 KIFAP3Q92845 792 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 CDCA7LQ96GN5 454 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 MPHOSPH8Q99549 860 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 TUBB2BQ9BVA1 445 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 ZCWPW1Q9H0M4 648 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 FAM217BQ9NTX9 383 aaPredicted RBP7.15□□□□□ -1.26
MCF2-205ENST00000437564 NDUFA13Q9P0J0 144 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 CTNNAL1Q9UBT7 734 aa7.15□□□□□ -1.26
MCF2-205ENST00000437564 MRPL11Q9Y3B7 192 aaKnown RBP7.15□□□□□ -1.26
MCF2-205ENST00000437564 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 IQANK1A0A1B0GTG1 560 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 BECN2A8MW95 431 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 PRPF6O94906 941 aaKnown RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 ATP6V1G2O95670 118 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 TOP1P11387 765 aaKnown RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 FUT4P22083 530 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 SKIV2L2P42285 1042 aaKnown RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 BLVRAP53004 296 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 RARSP54136 660 aaKnown RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 UBASH3AP57075 661 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 RAB15P59190 212 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 AP2B1P63010 937 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 CRY1Q16526 586 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 IMMTQ16891 758 aaKnown RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 PDCD4Q53EL6 469 aaKnown RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 FKBP15Q5T1M5 1219 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 FBXO31Q5XUX0 539 aaPredicted RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 TUBA3EQ6PEY2 450 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 STKLD1Q8NE28 680 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 GIMAP5Q96F15 307 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 PAWRQ96IZ0 340 aaKnown RBP7.15□□□□□ -1.27
MCF2-205ENST00000437564 HERC2P3Q9BVR0 1158 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 CARD11Q9BXL7 1154 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 NOD2Q9HC29 1040 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 INIPQ9NRY2 104 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 RHBDL2Q9NX52 303 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 POLG2Q9UHN1 485 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 TCEAL9Q9UHQ7 104 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 TRAF3IP3Q9Y228 551 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 ZNF711Q9Y462 761 aa7.15□□□□□ -1.27
MCF2-205ENST00000437564 A0A1W2PRQ8 180 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 DPPA5A6NC42 116 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 BTBD11A6QL63 1104 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 N4BP3O15049 544 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 NMT2O60551 498 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 RNASEH2AO75792 299 aaKnown RBP7.14□□□□□ -1.27
MCF2-205ENST00000437564 LCA5LO95447 670 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 APOEP02649 317 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 KCNA6P17658 529 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 TUFMP49411 452 aaKnown RBP7.14□□□□□ -1.27
MCF2-205ENST00000437564 PDE6CP51160 858 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 GPC3P51654 580 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 POLE2P56282 527 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 FAM69CQ0P6D2 419 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 LAPTM5Q13571 262 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 SAFB2Q14151 953 aaKnown RBP eCLIP7.14□□□□□ -1.27
MCF2-205ENST00000437564 ACCSLQ4AC99 568 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 WDR45BQ5MNZ6 344 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 NDUFAF5Q5TEU4 345 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 LLGL2Q6P1M3 1020 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 CCDC62Q6P9F0 684 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 SARM1Q6SZW1 724 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 TMEM92Q6UXU6 159 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 TBC1D9Q6ZT07 1266 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 MAELQ96JY0 434 aaKnown RBP7.14□□□□□ -1.27
MCF2-205ENST00000437564 CCDC42Q96M95 316 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 ZNF570Q96NI8 536 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 CCDC28BQ9BUN5 200 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 ZNF180Q9UJW8 692 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 KIAA1257Q9ULG3 409 aa7.14□□□□□ -1.27
MCF2-205ENST00000437564 FAM32AQ9Y421 112 aaKnown RBP7.14□□□□□ -1.27
MCF2-205ENST00000437564 TCOF1Q13428 1488 aaKnown RBP7.14□□□□□ -1.27
MCF2-205ENST00000437564 TMEM238LA0A1B0GVL6 79 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 B4GALT4O60513 344 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 CPA3P15088 417 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 CSTF2P33240 577 aaKnown RBP eCLIP7.13□□□□□ -1.27
MCF2-205ENST00000437564 STAT6P42226 847 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 CENPAP49450 140 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 DSTNP60981 165 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 MTMR3Q13615 1198 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 E2F2Q14209 437 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 ADRM1Q16186 407 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 TMTC4Q5T4D3 741 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 DEPDC1Q5TB30 811 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 KLC3Q6P597 504 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 FAM167BQ9BTA0 163 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 TRIM5Q9C035 493 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 TPK1Q9H3S4 243 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 ZBTB40Q9NUA8 1239 aa7.13□□□□□ -1.27
MCF2-205ENST00000437564 IMPACTQ9P2X3 320 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms