RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 CHD7Q9P2D1 2997 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 MYO9BQ13459 2157 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 LOC102724159A0A0B4J2E5 919 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 GRXCR1A8MXD5 290 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 PDHBP11177 359 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 PBX2P40425 430 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 PSMC6P62333 389 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 PWP2Q15269 919 aaKnown RBP18.48■□□□□ 0.55
CALD1-208ENST00000435928 DUSP28Q4G0W2 176 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 TMEM63BQ5T3F8 832 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 SLC30A10Q6XR72 485 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 TRPV6Q9H1D0 765 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 PNMA2Q9UL42 364 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 MYH6P13533 1939 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 UMODL1Q5DID0 1318 aa18.48■□□□□ 0.55
CALD1-208ENST00000435928 B4GALT4O60513 344 aa18.47■□□□□ 0.55
CALD1-208ENST00000435928 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
CALD1-208ENST00000435928 CALML3P27482 149 aa18.47■□□□□ 0.55
CALD1-208ENST00000435928 AKNAD1Q5T1N1 836 aa18.47■□□□□ 0.55
CALD1-208ENST00000435928 MFSD6Q6ZSS7 791 aa18.47■□□□□ 0.55
CALD1-208ENST00000435928 HERVK_113Q902F9 699 aa18.47■□□□□ 0.55
CALD1-208ENST00000435928 GAS2L1Q99501 681 aaPredicted RBP18.47■□□□□ 0.55
CALD1-208ENST00000435928 NOC4LQ9BVI4 516 aaKnown RBP18.47■□□□□ 0.55
CALD1-208ENST00000435928 WDR11Q9BZH6 1224 aa18.47■□□□□ 0.55
CALD1-208ENST00000435928 LNPKQ9C0E8 428 aa18.47■□□□□ 0.55
CALD1-208ENST00000435928 TANC1Q9C0D5 1861 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 FGBP02675 491 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 CPT1AP50416 773 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
CALD1-208ENST00000435928 CCL23P55773 120 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 ZNF543Q08ER8 600 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 RAB30Q15771 203 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 RNF207Q6ZRF8 634 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 TTC14Q96N46 770 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 MPHOSPH6Q99547 160 aaKnown RBP18.46■□□□□ 0.55
CALD1-208ENST00000435928 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
CALD1-208ENST00000435928 POLR3EQ9NVU0 708 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 CXXC1Q9P0U4 656 aaPredicted RBP18.46■□□□□ 0.55
CALD1-208ENST00000435928 MSRAQ9UJ68 235 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 SCN10AQ9Y5Y9 1956 aa18.46■□□□□ 0.55
CALD1-208ENST00000435928 PDE4DQ08499 809 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 TBC1D10CQ8IV04 446 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 USP38Q8NB14 1042 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 CLEC4DQ8WXI8 215 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 WNT8AQ9H1J5 351 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 ALDH8A1Q9H2A2 487 aaPredicted RBP18.45■□□□□ 0.54
CALD1-208ENST00000435928 NEDD4P46934 1319 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 WDR19Q8NEZ3 1342 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 RAD50Q92878 1312 aa18.45■□□□□ 0.54
CALD1-208ENST00000435928 SCN5AQ14524 2016 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 MYL3P08590 195 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 SNHG28P0DPA3 235 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 PURAQ00577 322 aaKnown RBP18.44■□□□□ 0.54
CALD1-208ENST00000435928 PPP2R5BQ15173 497 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 OTOP2Q7RTS6 562 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 OR6J1Q8NGC5 347 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 ESR2Q92731 530 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 PRDM12Q9H4Q4 367 aa18.44■□□□□ 0.54
CALD1-208ENST00000435928 MUC3AQ02505 3323 aa18.43■□□□□ 0.54
CALD1-208ENST00000435928 RBM47A0AV96 593 aaKnown RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 SUPT20HL2P0C7V6 817 aa18.43■□□□□ 0.54
CALD1-208ENST00000435928 RPS6P62753 249 aaKnown RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 BRDTQ58F21 947 aaPredicted RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 GPATCH4Q5T3I0 446 aaKnown RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 RPUSD2Q8IZ73 545 aaKnown RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
CALD1-208ENST00000435928 SYMPKQ92797 1274 aaKnown RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 GPHNQ9NQX3 736 aaPredicted RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 TRMT13Q9NUP7 481 aaKnown RBP18.43■□□□□ 0.54
CALD1-208ENST00000435928 TNKSO95271 1327 aa18.43■□□□□ 0.54
CALD1-208ENST00000435928 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
CALD1-208ENST00000435928 TTC28Q96AY4 2481 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 REV3LO60673 3130 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 NKRFO15226 690 aaKnown RBP eCLIP18.42■□□□□ 0.54
CALD1-208ENST00000435928 USH1GQ495M9 461 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 SCFD2Q8WU76 684 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 SCLYQ96I15 445 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 MTG1Q9BT17 334 aaPredicted RBP18.42■□□□□ 0.54
CALD1-208ENST00000435928 NKX2-4Q9H2Z4 354 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 SLC28A3Q9HAS3 691 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 TRANK1O15050 2925 aa18.42■□□□□ 0.54
CALD1-208ENST00000435928 B4DLN1 442 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 ZNF213O14771 459 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 SDSP20132 328 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 EDNRBP24530 442 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 MRPL12P52815 198 aaKnown RBP18.41■□□□□ 0.54
CALD1-208ENST00000435928 AAMPQ13685 434 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 FAM47CQ5HY64 1035 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 SLC4A7Q9Y6M7 1214 aa18.41■□□□□ 0.54
CALD1-208ENST00000435928 ZBBXA8MT70 800 aa18.4■□□□□ 0.54
CALD1-208ENST00000435928 PFKMP08237 780 aa18.4■□□□□ 0.54
CALD1-208ENST00000435928 CYP2C9P11712 490 aa18.4■□□□□ 0.54
CALD1-208ENST00000435928 NT5C2P49902 561 aa18.4■□□□□ 0.54
CALD1-208ENST00000435928 TJAP1Q5JTD0 557 aa18.4■□□□□ 0.54
CALD1-208ENST00000435928 IQCA1Q86XH1 822 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms