RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 ADAMTS19Q8TE59 1207 aa16.1■□□□□ 0.17
LINC00028-201ENST00000435497 FSD1Q9BTV5 496 aa16.1■□□□□ 0.17
LINC00028-201ENST00000435497 CCPG1Q9ULG6 757 aa16.1■□□□□ 0.17
LINC00028-201ENST00000435497 MTMR7Q9Y216 660 aa16.1■□□□□ 0.17
LINC00028-201ENST00000435497 SLC4A7Q9Y6M7 1214 aa16.1■□□□□ 0.17
LINC00028-201ENST00000435497 SCN5AQ14524 2016 aa16.1■□□□□ 0.17
LINC00028-201ENST00000435497 ICAM1P05362 532 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 CYP2C9P11712 490 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 SLC16A2P36021 539 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 TTLL4Q14679 1199 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 VPS53Q5VIR6 699 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 BTNL9Q6UXG8 535 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 RANBP17Q9H2T7 1088 aaKnown RBP16.09■□□□□ 0.17
LINC00028-201ENST00000435497 TRMT13Q9NUP7 481 aaKnown RBP16.09■□□□□ 0.17
LINC00028-201ENST00000435497 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 PCDHB15Q9Y5E8 787 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 PCDHA11Q9Y5I1 949 aa16.09■□□□□ 0.17
LINC00028-201ENST00000435497 RBM47A0AV96 593 aaKnown RBP16.08■□□□□ 0.16
LINC00028-201ENST00000435497 NFIBO00712 420 aa16.08■□□□□ 0.16
LINC00028-201ENST00000435497 ERC2O15083 957 aa16.08■□□□□ 0.16
LINC00028-201ENST00000435497 FGRP09769 529 aa16.08■□□□□ 0.16
LINC00028-201ENST00000435497 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
LINC00028-201ENST00000435497 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
LINC00028-201ENST00000435497 TET1Q8NFU7 2136 aa16.08■□□□□ 0.16
LINC00028-201ENST00000435497 DCAF4Q8WV16 495 aa16.08■□□□□ 0.16
LINC00028-201ENST00000435497 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
LINC00028-201ENST00000435497 SCN10AQ9Y5Y9 1956 aa16.07■□□□□ 0.16
LINC00028-201ENST00000435497 TRANK1O15050 2925 aa16.07■□□□□ 0.16
LINC00028-201ENST00000435497 ORC4O43929 436 aa16.07■□□□□ 0.16
LINC00028-201ENST00000435497 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
LINC00028-201ENST00000435497 PPP2R2DQ66LE6 453 aa16.07■□□□□ 0.16
LINC00028-201ENST00000435497 PPP1R13LQ8WUF5 828 aa16.07■□□□□ 0.16
LINC00028-201ENST00000435497 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
LINC00028-201ENST00000435497 UHRF1Q96T88 793 aaPredicted RBP16.07■□□□□ 0.16
LINC00028-201ENST00000435497 XIRP2A4UGR9 3374 aa16.07■□□□□ 0.16
LINC00028-201ENST00000435497 TNKSO95271 1327 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 SALL3Q9BXA9 1300 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 RFXAPO00287 272 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 MYL3P08590 195 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 BMP1P13497 986 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 ATP2A2P16615 1042 aaKnown RBP16.06■□□□□ 0.16
LINC00028-201ENST00000435497 CCDC96Q2M329 555 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 SYDE2Q5VT97 1194 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 DEFB128Q7Z7B8 93 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 POLR3EQ9NVU0 708 aa16.06■□□□□ 0.16
LINC00028-201ENST00000435497 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
LINC00028-201ENST00000435497 FRMPD2Q68DX3 1309 aaPredicted RBP16.05■□□□□ 0.16
LINC00028-201ENST00000435497 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
LINC00028-201ENST00000435497 SUPT20HL2P0C7V6 817 aa16.05■□□□□ 0.16
LINC00028-201ENST00000435497 TFF2Q03403 129 aa16.05■□□□□ 0.16
LINC00028-201ENST00000435497 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
LINC00028-201ENST00000435497 ALX1Q15699 326 aa16.05■□□□□ 0.16
LINC00028-201ENST00000435497 NBPF20Q3BBV1 942 aa16.05■□□□□ 0.16
LINC00028-201ENST00000435497 SLC30A10Q6XR72 485 aa16.05■□□□□ 0.16
LINC00028-201ENST00000435497 NECAB3Q96P71 396 aaPredicted RBP16.05■□□□□ 0.16
LINC00028-201ENST00000435497 GPCPD1Q9NPB8 672 aa16.05■□□□□ 0.16
LINC00028-201ENST00000435497 TRIP12Q14669 1992 aaPredicted RBP16.05■□□□□ 0.16
LINC00028-201ENST00000435497 PTPDC1A2A3K4 754 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 EPOPA6NHQ4 379 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 ARHGEF15O94989 841 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 PFKMP08237 780 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 TOP1P11387 765 aaKnown RBP16.04■□□□□ 0.16
LINC00028-201ENST00000435497 POU3F3P20264 500 aaPredicted RBP16.04■□□□□ 0.16
LINC00028-201ENST00000435497 MX1P20591 662 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 TMEM67Q5HYA8 995 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 MICALL1Q8N3F8 863 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 OR6J1Q8NGC5 347 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 COPS5Q92905 334 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 MTG1Q9BT17 334 aaPredicted RBP16.04■□□□□ 0.16
LINC00028-201ENST00000435497 MTCH2Q9Y6C9 303 aa16.04■□□□□ 0.16
LINC00028-201ENST00000435497 A6NJR5 290 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 FGAP02671 866 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 CA3P07451 260 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 EDNRBP24530 442 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 CALML3P27482 149 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 CPT1AP50416 773 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 CERS4Q9HA82 394 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 TCP11L1Q9NUJ3 509 aa16.03■□□□□ 0.16
LINC00028-201ENST00000435497 IQCF3P0C7M6 154 aa16.02■□□□□ 0.16
LINC00028-201ENST00000435497 PDHBP11177 359 aa16.02■□□□□ 0.16
LINC00028-201ENST00000435497 RPS6P62753 249 aaKnown RBP16.02■□□□□ 0.16
LINC00028-201ENST00000435497 FAM47CQ5HY64 1035 aa16.02■□□□□ 0.16
LINC00028-201ENST00000435497 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.16
LINC00028-201ENST00000435497 KRT40Q6A162 431 aa16.02■□□□□ 0.16
LINC00028-201ENST00000435497 NFRKBQ6P4R8 1299 aa16.02■□□□□ 0.16
LINC00028-201ENST00000435497 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.16
LINC00028-201ENST00000435497 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
LINC00028-201ENST00000435497 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
LINC00028-201ENST00000435497 BRWD1Q9NSI6 2320 aa16.01■□□□□ 0.15
LINC00028-201ENST00000435497 NKRFO15226 690 aaKnown RBP eCLIP16.01■□□□□ 0.15
LINC00028-201ENST00000435497 ARIH2O95376 493 aa16.01■□□□□ 0.15
LINC00028-201ENST00000435497 KCNQ1P51787 676 aa16.01■□□□□ 0.15
LINC00028-201ENST00000435497 TAP1Q03518 808 aa16.01■□□□□ 0.15
LINC00028-201ENST00000435497 PDE4DQ08499 809 aa16.01■□□□□ 0.15
LINC00028-201ENST00000435497 FAM227BQ96M60 508 aa16.01■□□□□ 0.15
LINC00028-201ENST00000435497 HELLSQ9NRZ9 838 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms