RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 NKPD1Q17RQ9 610 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 KIZQ2M2Z5 673 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 FAM47CQ5HY64 1035 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 CREG2Q8IUH2 290 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 SPACA3Q8IXA5 215 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 OR2W6PQ8NHA6 318 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 NPLOC4Q8TAT6 608 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 FRS2Q8WU20 508 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 ASB11Q8WXH4 323 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 CABP5Q9NP86 173 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 PIM2Q9P1W9 311 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 TCRBV16S1A1N1A0A5B0 115 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 BRINP1O60477 761 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 KPNA6O60684 536 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 PDGFRBP09619 1106 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 POU3F2P20265 443 aaPredicted RBP8.15□□□□□ -1.1
USP54-206ENST00000433394 ST5P78524 1137 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 PAK1Q13153 545 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 ANKLE2Q86XL3 938 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 KREMEN2Q8NCW0 462 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 CHAMP1Q96JM3 812 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 HRASLS5Q96KN8 279 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 MMP19Q99542 508 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 ZKSCAN5Q9Y2L8 839 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 PCDHA9Q9Y5H5 950 aa8.15□□□□□ -1.1
USP54-206ENST00000433394 RASGRP1O95267 797 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 RPL10P27635 214 aaKnown RBP8.14□□□□□ -1.11
USP54-206ENST00000433394 EGR3Q06889 387 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 STRN3Q13033 797 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 LAPTM5Q13571 262 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 DHCR24Q15392 516 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 ZCCHC8Q6NZY4 707 aaKnown RBP8.14□□□□□ -1.11
USP54-206ENST00000433394 KCNT2Q6UVM3 1135 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 WAPLQ7Z5K2 1190 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 FGD2Q7Z6J4 655 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 DDX42Q86XP3 938 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP54-206ENST00000433394 RPUSD2Q8IZ73 545 aaKnown RBP8.14□□□□□ -1.11
USP54-206ENST00000433394 USHBP1Q8N6Y0 703 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 PTCHD1Q96NR3 888 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 TTC1Q99614 292 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 MCMBPQ9BTE3 642 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 AP5S1Q9NUS5 200 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 PCDHA8Q9Y5H6 950 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 NPFFR2Q9Y5X5 522 aa8.14□□□□□ -1.11
USP54-206ENST00000433394 NPHS1O60500 1241 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 ZNF460Q14592 562 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 TESK1Q15569 626 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 PIK3R6Q5UE93 754 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 HLA-DQA1Q5Y7H0 255 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 CDCA2Q69YH5 1023 aaPredicted RBP8.13□□□□□ -1.11
USP54-206ENST00000433394 JAMLQ86YT9 394 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 SCLYQ96I15 445 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 SAMD15Q9P1V8 674 aa8.13□□□□□ -1.11
USP54-206ENST00000433394 FAM47E-STBD1D6RA91 191 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 FGF10O15520 208 aaPredicted RBP8.12□□□□□ -1.11
USP54-206ENST00000433394 MARCH6O60337 910 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 GAS7O60861 476 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 GRIK1P39086 918 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 RPL11P62913 178 aaKnown RBP8.12□□□□□ -1.11
USP54-206ENST00000433394 EXOSC10Q01780 885 aaKnown RBP8.12□□□□□ -1.11
USP54-206ENST00000433394 OCRLQ01968 901 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 PLEKHG6Q3KR16 790 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 RNF219Q5W0B1 726 aaPredicted RBP8.12□□□□□ -1.11
USP54-206ENST00000433394 LBX2Q6XYB7 198 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 KIF18BQ86Y91 864 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 PLD6Q8N2A8 252 aaKnown RBP8.12□□□□□ -1.11
USP54-206ENST00000433394 AFAP1L2Q8N4X5 818 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 WDR66Q8TBY9 1149 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 MISP3Q96FF7 219 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 IRF2BPLQ9H1B7 796 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 PCDHA2Q9Y5H9 948 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
USP54-206ENST00000433394 FOSL1P15407 271 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 DUSP4Q13115 394 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 GAB4Q2WGN9 574 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 DENND5AQ6IQ26 1287 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 PKN3Q6P5Z2 889 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 EP400NLQ6ZTU2 488 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 C11orf74Q86VG3 221 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 SHISA5Q8N114 240 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 STK11IPQ8N1F8 1099 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 CCDC136Q96JN2 1154 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 FCRL2Q96LA5 508 aaPredicted RBP8.11□□□□□ -1.11
USP54-206ENST00000433394 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
USP54-206ENST00000433394 ASXL2Q76L83 1435 aa8.11□□□□□ -1.11
USP54-206ENST00000433394 PITPNM2Q9BZ72 1349 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 A0A1W2PQ27 194 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 A0A1W2PQ64 194 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 A0A1W2PQC6 194 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 A0A1W2PQD8 194 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 ZEB2O60315 1214 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 SRGAP2CP0DJJ0 459 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 GUCY2FP51841 1108 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 LSAMPQ13449 338 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 FAM50AQ14320 339 aaKnown RBP8.1□□□□□ -1.11
USP54-206ENST00000433394 RTP2Q5QGT7 225 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 ODR4Q5SWX8 454 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 NECAB2Q7Z6G3 386 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms