RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PALD1Q9ULE6 856 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NIP7Q9Y221 180 aaKnown RBP eCLIP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 PMM2O15305 246 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SPAG6O75602 509 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 EPHB4P54760 987 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NEDD1Q8NHV4 660 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 JDP2Q8WYK2 163 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 HAUS1Q96CS2 278 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 IFIH1Q9BYX4 1025 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 PSD3Q9NYI0 1048 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 MYH4Q9Y623 1939 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 DLEC1Q9Y238 1755 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 MBD4O95243 580 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 ZSCAN20P17040 1043 aaPredicted RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 TNNT3P45378 269 aaPredicted RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CRKLP46109 303 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 RESTQ13127 1097 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 TMEM179Q6ZVK1 233 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC91Q7Z6B0 441 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 PLA2G4DQ86XP0 818 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 GMCL1P1Q8NEA9 526 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 AP3B1O00203 1094 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 IPO5O00410 1097 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 EPB41P11171 864 aaKnown RBP4.16□□□□□ -1.74
SHPRH-205ENST00000433355 CYP7A1P22680 504 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 SCNN1DP51172 638 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 GNPTABQ3T906 1256 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 NIPA1Q7RTP0 329 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 IFNL3Q8IZI9 196 aa4.16□□□□□ -1.74
SHPRH-205ENST00000433355 POLR3DP05423 398 aaPredicted RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 HNRNPH3P31942 346 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 NAA20P61599 178 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 SLC20A2Q08357 652 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 PFKFB3Q16875 520 aaPredicted RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 MAP3K21Q5TCX8 1036 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 LIN9Q5TKA1 542 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 IGSF22Q8N9C0 903 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 ERGIC2Q96RQ1 377 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 SEZ6LQ9BYH1 1024 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 RPL26L1Q9UNX3 145 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF532Q9HCE3 1301 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 MYO10Q9HD67 2058 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 FGAP02671 866 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 PFKFB1P16118 471 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 TNFRSF8P28908 595 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 ASIC1P78348 528 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 RBM46Q8TBY0 533 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 LARP4BQ92615 738 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 FAM114A2Q9NRY5 505 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 PRR12Q9ULL5 1215 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 SPATA31A1Q5TZJ5 1347 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 QSER1Q2KHR3 1735 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 GTF2H1P32780 548 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 NLRP5P59047 1200 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 ZC3H6P61129 1189 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 CWF19L2Q2TBE0 894 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 SLITRK6Q9H5Y7 841 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 AS3MTQ9HBK9 375 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 ADD3Q9UEY8 706 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 STRIP2Q9ULQ0 834 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 MRPL11Q9Y3B7 192 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 PNMA6FA0A0J9YX94 578 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 LGALS16A8MUM7 142 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 PSMD14O00487 310 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 PDXKO00764 312 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 MAPTP10636 758 aaKnown RBP4.15□□□□□ -1.74
SHPRH-205ENST00000433355 CCNE1P24864 410 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 MAN2A1Q16706 1144 aa4.15□□□□□ -1.74
SHPRH-205ENST00000433355 SLC1A4P43007 532 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 CALCOCO2Q13137 446 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 SLFN12LQ6IEE8 588 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 ARHGAP24Q8N264 748 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 KIF11P52732 1056 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 TAP1Q03518 808 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 STILQ15468 1287 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 DNAJC7Q99615 494 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 OLFML3Q9NRN5 406 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 NYAP2Q9P242 653 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 ARMCX3Q9UH62 379 aaPredicted RBP4.15□□□□□ -1.75
SHPRH-205ENST00000433355 SAR1BQ9Y6B6 198 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 BTNL10A8MVZ5 291 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 RBM5P52756 815 aaKnown RBP eCLIP4.15□□□□□ -1.75
SHPRH-205ENST00000433355 WDR93Q6P2C0 686 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 SP8Q8IXZ3 490 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 TMEM174Q8WUU8 243 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 ZC3H12CQ9C0D7 883 aaKnown RBP4.15□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC8Q9H0W5 538 aaPredicted RBP4.15□□□□□ -1.75
SHPRH-205ENST00000433355 CDC23Q9UJX2 597 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 CEP250Q9BV73 2442 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 MROH7-TTC4A0A0A0MT08 1334 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 RASGRF1Q13972 1273 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 PDIA6Q15084 440 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC40Q4G0X9 1142 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 ATG9AQ7Z3C6 839 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 VSIG1Q86XK7 387 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF677Q86XU0 584 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 SLC26A6Q9BXS9 759 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 ZBTB3Q9H5J0 574 aa4.15□□□□□ -1.75
SHPRH-205ENST00000433355 LRWD1Q9UFC0 647 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms