RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 LCORLQ8N3X6 602 aa18.88■□□□□ 0.61
NUP50-209ENST00000432340 NSUN3Q9H649 340 aaKnown RBP18.88■□□□□ 0.61
NUP50-209ENST00000432340 A1CFQ9NQ94 594 aaKnown RBP18.88■□□□□ 0.61
NUP50-209ENST00000432340 ADD3Q9UEY8 706 aaKnown RBP18.88■□□□□ 0.61
NUP50-209ENST00000432340 ZNF532Q9HCE3 1301 aa18.88■□□□□ 0.61
NUP50-209ENST00000432340 SOWAHBA6NEL2 793 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 TMEM221A6NGB7 291 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 M0R296 226 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 NKRFO15226 690 aaKnown RBP eCLIP18.87■□□□□ 0.61
NUP50-209ENST00000432340 SELPP16109 830 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 NUBP1P53384 320 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 ZNF318Q5VUA4 2279 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 TRIM67Q6ZTA4 783 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 EEPD1Q7L9B9 569 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 RNF135Q8IUD6 432 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 ATOH1Q92858 354 aaPredicted RBP18.87■□□□□ 0.61
NUP50-209ENST00000432340 PDGFCQ9NRA1 345 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 RNF146Q9NTX7 359 aa18.87■□□□□ 0.61
NUP50-209ENST00000432340 TLR7Q9NYK1 1049 aaKnown RBP18.87■□□□□ 0.61
NUP50-209ENST00000432340 ANP32CO43423 234 aa18.86■□□□□ 0.61
NUP50-209ENST00000432340 TCF15Q12870 199 aa18.86■□□□□ 0.61
NUP50-209ENST00000432340 COL19A1Q14993 1142 aa18.86■□□□□ 0.61
NUP50-209ENST00000432340 FBXL6Q8N531 539 aa18.86■□□□□ 0.61
NUP50-209ENST00000432340 EAF2Q96CJ1 260 aaPredicted RBP18.86■□□□□ 0.61
NUP50-209ENST00000432340 MPHOSPH6Q99547 160 aaKnown RBP18.86■□□□□ 0.61
NUP50-209ENST00000432340 WDR11Q9BZH6 1224 aa18.86■□□□□ 0.61
NUP50-209ENST00000432340 ZNF287Q9HBT7 754 aa18.86■□□□□ 0.61
NUP50-209ENST00000432340 CLDND1Q9NY35 253 aa18.86■□□□□ 0.61
NUP50-209ENST00000432340 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
NUP50-209ENST00000432340 DEFB103AP81534 67 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 PTGISQ16647 500 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 IER5LQ5T953 404 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 LRRC8DQ7L1W4 858 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 ERC1Q8IUD2 1116 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 OR6J1Q8NGC5 347 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 CHURC1Q8WUH1 139 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 ARMT1Q9H993 441 aa18.85■□□□□ 0.61
NUP50-209ENST00000432340 CXCL10P02778 98 aa18.84■□□□□ 0.61
NUP50-209ENST00000432340 AMHP03971 560 aa18.84■□□□□ 0.61
NUP50-209ENST00000432340 TCEAL5Q5H9L2 206 aa18.84■□□□□ 0.61
NUP50-209ENST00000432340 FAM160B2Q86V87 743 aa18.84■□□□□ 0.61
NUP50-209ENST00000432340 MORC4Q8TE76 937 aa18.84■□□□□ 0.61
NUP50-209ENST00000432340 TRERF1Q96PN7 1200 aa18.84■□□□□ 0.61
NUP50-209ENST00000432340 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
NUP50-209ENST00000432340 MKNK2Q9HBH9 465 aa18.84■□□□□ 0.61
NUP50-209ENST00000432340 ARPP21Q9UBL0 812 aaPredicted RBP18.84■□□□□ 0.61
NUP50-209ENST00000432340 H3BNC9 293 aa18.83■□□□□ 0.6
NUP50-209ENST00000432340 MBD4O95243 580 aa18.83■□□□□ 0.6
NUP50-209ENST00000432340 STAT2P52630 851 aa18.83■□□□□ 0.6
NUP50-209ENST00000432340 ATP8B2P98198 1209 aa18.83■□□□□ 0.6
NUP50-209ENST00000432340 TMCO2Q7Z6W1 182 aaPredicted RBP18.83■□□□□ 0.6
NUP50-209ENST00000432340 ANKS1AQ92625 1134 aa18.83■□□□□ 0.6
NUP50-209ENST00000432340 C17orf80Q9BSJ5 609 aa18.83■□□□□ 0.6
NUP50-209ENST00000432340 ISY1Q9ULR0 285 aaKnown RBP18.83■□□□□ 0.6
NUP50-209ENST00000432340 REV3LO60673 3130 aa18.83■□□□□ 0.6
NUP50-209ENST00000432340 PTPRZ1P23471 2315 aaPredicted RBP18.82■□□□□ 0.6
NUP50-209ENST00000432340 BMP3P12645 472 aa18.82■□□□□ 0.6
NUP50-209ENST00000432340 IKQ13123 557 aaPredicted RBP18.82■□□□□ 0.6
NUP50-209ENST00000432340 SMAD4Q13485 552 aaKnown RBP18.82■□□□□ 0.6
NUP50-209ENST00000432340 GPM6BQ13491 265 aa18.82■□□□□ 0.6
NUP50-209ENST00000432340 PPP2R5BQ15173 497 aa18.82■□□□□ 0.6
NUP50-209ENST00000432340 EPC2Q52LR7 807 aa18.82■□□□□ 0.6
NUP50-209ENST00000432340 AACSQ86V21 672 aa18.82■□□□□ 0.6
NUP50-209ENST00000432340 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
NUP50-209ENST00000432340 CLIP2Q9UDT6 1046 aa18.82■□□□□ 0.6
NUP50-209ENST00000432340 TCRBV5S4A2TA0A5A2 114 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 PROB1E7EW31 1015 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 STXBP3O00186 592 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 ALAS1P13196 640 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 RBL2Q08999 1139 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 FAM117BQ6P1L5 589 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 LRRC47Q8N1G4 583 aaKnown RBP18.81■□□□□ 0.6
NUP50-209ENST00000432340 MKL1Q969V6 931 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.81■□□□□ 0.6
NUP50-209ENST00000432340 CYP39A1Q9NYL5 469 aa18.81■□□□□ 0.6
NUP50-209ENST00000432340 EMSYQ7Z589 1322 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
NUP50-209ENST00000432340 COL11A1P12107 1806 aaPredicted RBP18.8■□□□□ 0.6
NUP50-209ENST00000432340 CYP2D7A0A087X1C5 515 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 A6NJR5 290 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 B4DLN1 442 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 PRKAB2O43741 272 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 MRPL12P52815 198 aaKnown RBP18.8■□□□□ 0.6
NUP50-209ENST00000432340 RPAINQ86UA6 219 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 SESTD1Q86VW0 696 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 SP7Q8TDD2 431 aaPredicted RBP18.8■□□□□ 0.6
NUP50-209ENST00000432340 SCFD2Q8WU76 684 aa18.8■□□□□ 0.6
NUP50-209ENST00000432340 PARP14Q460N5 1801 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 RBM47A0AV96 593 aaKnown RBP18.79■□□□□ 0.6
NUP50-209ENST00000432340 GOLIM4O00461 696 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 MBTPS2O43462 519 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 TTLL1O95922 423 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 PTGS1P23219 599 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 PPP4R3BQ5MIZ7 849 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 NSMFQ6X4W1 530 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 PPP2R3CQ969Q6 453 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 YME1L1Q96TA2 773 aa18.79■□□□□ 0.6
NUP50-209ENST00000432340 LMAN2LQ9H0V9 348 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms