RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 SYDE2Q5VT97 1194 aa16.79■□□□□ 0.28
SEC13-212ENST00000432213 DCAF4Q8WV16 495 aa16.79■□□□□ 0.28
SEC13-212ENST00000432213 NOC4LQ9BVI4 516 aaKnown RBP16.79■□□□□ 0.28
SEC13-212ENST00000432213 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
SEC13-212ENST00000432213 TMEM265A0A087WTH1 108 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 PDHBP11177 359 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 PPIGQ13427 754 aaKnown RBP eCLIP16.78■□□□□ 0.28
SEC13-212ENST00000432213 ADGRE1Q14246 886 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 COPS5Q92905 334 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 ZKSCAN3Q9BRR0 538 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 LNPKQ9C0E8 428 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 PRDM12Q9H4Q4 367 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 SPC25Q9HBM1 224 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 TOMM22Q9NS69 142 aa16.78■□□□□ 0.28
SEC13-212ENST00000432213 MYH7BA7E2Y1 1941 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 GOLGA8HP0CJ92 632 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 MYOGP15173 224 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 MCMDC2Q4G0Z9 681 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 SCLYQ96I15 445 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 HIPK3Q9H422 1215 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 IL23AQ9NPF7 189 aa16.77■□□□□ 0.28
SEC13-212ENST00000432213 TRMT13Q9NUP7 481 aaKnown RBP16.77■□□□□ 0.28
SEC13-212ENST00000432213 COL4A4P53420 1690 aaPredicted RBP16.77■□□□□ 0.28
SEC13-212ENST00000432213 CCDC171Q6TFL3 1326 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 TOP1P11387 765 aaKnown RBP16.76■□□□□ 0.27
SEC13-212ENST00000432213 CYP2C9P11712 490 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 RABGGTBP53611 331 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 HDAC1Q13547 482 aaPredicted RBP16.76■□□□□ 0.27
SEC13-212ENST00000432213 TMEM199Q8N511 208 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 HERVK_113Q902F9 699 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 IL25Q9H293 177 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 NKX2-4Q9H2Z4 354 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 VTA1Q9NP79 307 aa16.76■□□□□ 0.27
SEC13-212ENST00000432213 ZMYM6O95789 1325 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
SEC13-212ENST00000432213 PTPDC1A2A3K4 754 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 TLR3O15455 904 aaKnown RBP16.75■□□□□ 0.27
SEC13-212ENST00000432213 ARIH2O95376 493 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 SNHG28P0DPA3 235 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 CALML3P27482 149 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 DUSP28Q4G0W2 176 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 IQSEC1Q6DN90 963 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 OTOP2Q7RTS6 562 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 TBC1D5Q92609 795 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 AP5M1Q9H0R1 490 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
SEC13-212ENST00000432213 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
SEC13-212ENST00000432213 DOCK5Q9H7D0 1870 aa16.74■□□□□ 0.27
SEC13-212ENST00000432213 RBM47A0AV96 593 aaKnown RBP16.74■□□□□ 0.27
SEC13-212ENST00000432213 IGHDP01880 384 aa16.74■□□□□ 0.27
SEC13-212ENST00000432213 PURAQ00577 322 aaKnown RBP16.74■□□□□ 0.27
SEC13-212ENST00000432213 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
SEC13-212ENST00000432213 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
SEC13-212ENST00000432213 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
SEC13-212ENST00000432213 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
SEC13-212ENST00000432213 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
SEC13-212ENST00000432213 COL20A1Q9P218 1284 aa16.74■□□□□ 0.27
SEC13-212ENST00000432213 ARHGEF15O94989 841 aa16.73■□□□□ 0.27
SEC13-212ENST00000432213 EDNRBP24530 442 aa16.73■□□□□ 0.27
SEC13-212ENST00000432213 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
SEC13-212ENST00000432213 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
SEC13-212ENST00000432213 Q9Y3F1 56 aa16.73■□□□□ 0.27
SEC13-212ENST00000432213 TRANK1O15050 2925 aa16.73■□□□□ 0.27
SEC13-212ENST00000432213 TTC28Q96AY4 2481 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 CABYRO75952 493 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 MYL3P08590 195 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 TTLL4Q14679 1199 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 USH1GQ495M9 461 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 PLEKHM2Q8IWE5 1019 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
SEC13-212ENST00000432213 TNKSO95271 1327 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 FGBP02675 491 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 SDSP20132 328 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 CCDC85BQ15834 202 aaPredicted RBP16.71■□□□□ 0.27
SEC13-212ENST00000432213 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 SPRED2Q7Z698 418 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 SMC5Q8IY18 1101 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 OR6J1Q8NGC5 347 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 MUC3AQ02505 3323 aa16.71■□□□□ 0.27
SEC13-212ENST00000432213 NBPF20Q3BBV1 942 aa16.7■□□□□ 0.26
SEC13-212ENST00000432213 DEFB128Q7Z7B8 93 aa16.7■□□□□ 0.26
SEC13-212ENST00000432213 WDR19Q8NEZ3 1342 aa16.7■□□□□ 0.26
SEC13-212ENST00000432213 EPOPA6NHQ4 379 aa16.69■□□□□ 0.26
SEC13-212ENST00000432213 B4E1Z4 1266 aa16.69■□□□□ 0.26
SEC13-212ENST00000432213 RFXAPO00287 272 aa16.69■□□□□ 0.26
SEC13-212ENST00000432213 KDM4AO75164 1064 aa16.69■□□□□ 0.26
SEC13-212ENST00000432213 CDC37Q16543 378 aaPredicted RBP16.69■□□□□ 0.26
SEC13-212ENST00000432213 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
SEC13-212ENST00000432213 MFSD6Q6ZSS7 791 aa16.69■□□□□ 0.26
SEC13-212ENST00000432213 BAZ2BQ9UIF8 2168 aaKnown RBP16.69■□□□□ 0.26
SEC13-212ENST00000432213 OPLAHO14841 1288 aa16.68■□□□□ 0.26
SEC13-212ENST00000432213 ZEB2O60315 1214 aa16.68■□□□□ 0.26
SEC13-212ENST00000432213 GPNMBQ14956 572 aa16.68■□□□□ 0.26
SEC13-212ENST00000432213 SLC35G1Q2M3R5 365 aa16.68■□□□□ 0.26
SEC13-212ENST00000432213 TCTN1Q2MV58 587 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms