RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 NUB1Q9Y5A7 615 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 CTSWP56202 376 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 IFNL3Q8IZI9 196 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 GJA10Q969M2 543 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 HEXIM1O94992 359 aaKnown RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 ABL1P00519 1130 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 DEPTORQ8TB45 409 aa12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 CACTINQ8WUQ7 758 aaKnown RBP12.78□□□□□ -0.36
RIMKLA-202ENST00000431473 GYS2P54840 703 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 FANCBQ8NB91 859 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 FTOQ9C0B1 505 aaKnown RBP eCLIP12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 BZW2Q9Y6E2 419 aaKnown RBP12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 PLTPP55058 493 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 YWHAEP62258 255 aaKnown RBP12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 MYL7Q01449 175 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 KMT5BQ4FZB7 885 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 DISC1Q9NRI5 854 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 CYP4F22Q6NT55 531 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 LCA5Q86VQ0 697 aa12.77□□□□□ -0.36
RIMKLA-202ENST00000431473 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 USP17L12C9JPN9 530 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 USP17L21D6R901 530 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 PRKG1Q13976 671 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 NLRX1Q86UT6 975 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 NLRP7Q8WX94 980 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 ESYT2A0FGR8 921 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 LMNB1P20700 586 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 CNGA1P29973 690 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 BTG4Q9NY30 223 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 BAG5Q9UL15 447 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 WDR91A4D1P6 747 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 SCG2P13521 617 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 POLE2P56282 527 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 NEK8Q86SG6 692 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 KIAA1024Q9UPX6 916 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 NNTQ13423 1086 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 WDR62O43379 1518 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 ABCC4O15439 1325 aa12.77□□□□□ -0.37
RIMKLA-202ENST00000431473 EVI5O60447 810 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 HDLBPQ00341 1268 aaKnown RBP12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 GLG1Q92896 1179 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 THEGQ9P2T0 379 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 FIS1Q9Y3D6 152 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 H7C0C1 242 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 ATP5OP48047 213 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 M0R2C6 588 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 SLC12A1Q13621 1099 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 ABCA5Q8WWZ7 1642 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 ATP10BO94823 1461 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 HAUS8Q9BT25 410 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 NHEJ1Q9H9Q4 299 aaPredicted RBP12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 ZBED4O75132 1171 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 FTCDO95954 541 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 TAF11Q15544 211 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 MAML1Q92585 1016 aa12.76□□□□□ -0.37
RIMKLA-202ENST00000431473 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 SGO2Q562F6 1265 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 CYP4A11Q02928 519 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 SCOCQ9UIL1 159 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 PCDHB4Q9Y5E5 795 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 TNKSO95271 1327 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 SYNMO15061 1565 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 NSFP46459 744 aaKnown RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 DYNLT1P63172 113 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 GCNT4Q9P109 453 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 ORC6Q9Y5N6 252 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 MAP3K7O43318 606 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 TTC4O95801 387 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 EEF1B2P24534 225 aaKnown RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 APBA1Q02410 837 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 ASPHQ12797 758 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 FBXO38Q6PIJ6 1188 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 LSG1Q9H089 658 aaKnown RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 RTEL1Q9NZ71 1219 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 KDM5CP41229 1560 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 KLRF2D3W0D1 207 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 BCAMP50895 628 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 HP1BP3Q5SSJ5 553 aaPredicted RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 GARSP41250 739 aaKnown RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 MRPS25P82663 173 aaKnown RBP12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 XKR9Q5GH70 373 aa12.75□□□□□ -0.37
RIMKLA-202ENST00000431473 ZNF449Q6P9G9 518 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms