RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 MLKLQ8NB16 471 aa18.84■□□□□ 0.61
USHBP1-203ENST00000431146 TEPSINQ96N21 525 aa18.84■□□□□ 0.61
USHBP1-203ENST00000431146 MTMR9Q96QG7 549 aa18.84■□□□□ 0.61
USHBP1-203ENST00000431146 FANCLQ9NW38 375 aa18.84■□□□□ 0.61
USHBP1-203ENST00000431146 CDC25BP30305 580 aa18.83■□□□□ 0.61
USHBP1-203ENST00000431146 BTNL9Q6UXG8 535 aa18.83■□□□□ 0.61
USHBP1-203ENST00000431146 CABP7Q86V35 215 aa18.83■□□□□ 0.61
USHBP1-203ENST00000431146 C17orf53Q8N3J3 647 aaPredicted RBP18.83■□□□□ 0.61
USHBP1-203ENST00000431146 MED15Q96RN5 788 aa18.83■□□□□ 0.61
USHBP1-203ENST00000431146 P2RX7Q99572 595 aaKnown RBP18.83■□□□□ 0.61
USHBP1-203ENST00000431146 XPO4Q9C0E2 1151 aaKnown RBP18.83■□□□□ 0.61
USHBP1-203ENST00000431146 HACL1Q9UJ83 578 aa18.83■□□□□ 0.61
USHBP1-203ENST00000431146 MEIS2O14770 477 aa18.83■□□□□ 0.6
USHBP1-203ENST00000431146 CD44P16070 742 aaKnown RBP18.83■□□□□ 0.6
USHBP1-203ENST00000431146 KLHL10Q6JEL2 608 aa18.83■□□□□ 0.6
USHBP1-203ENST00000431146 PYM1Q9BRP8 204 aaKnown RBP18.83■□□□□ 0.6
USHBP1-203ENST00000431146 CCSER1Q9C0I3 900 aa18.83■□□□□ 0.6
USHBP1-203ENST00000431146 PHF20L1A8MW92 1017 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 LRMPQ12912 555 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 KIFC2Q96AC6 838 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 GSDMAQ96QA5 445 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 DDX25Q9UHL0 483 aaKnown RBP18.82■□□□□ 0.6
USHBP1-203ENST00000431146 GTPBP6O43824 516 aaPredicted RBP18.82■□□□□ 0.6
USHBP1-203ENST00000431146 PLCG1P19174 1290 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 FANCCQ00597 558 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 MAP3K10Q02779 954 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 KIF4BQ2VIQ3 1234 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 DPF2Q92785 391 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 AK8Q96MA6 479 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 ANO3Q9BYT9 981 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 VCPKMTQ9H867 229 aa18.82■□□□□ 0.6
USHBP1-203ENST00000431146 POTEMA6NI47 508 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 ZNF500O60304 480 aaPredicted RBP18.81■□□□□ 0.6
USHBP1-203ENST00000431146 STX17P56962 302 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 TNFAIP1Q13829 316 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 ARID5BQ14865 1188 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 CCDC174Q6PII3 467 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 FILIP1Q7Z7B0 1213 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 IGSF22Q8N9C0 903 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 MMTAG2Q9BU76 263 aaKnown RBP18.81■□□□□ 0.6
USHBP1-203ENST00000431146 FBXO28Q9NVF7 368 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 DACH1Q9UI36 760 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 PYCARDQ9ULZ3 195 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 SYNPO2Q9UMS6 1093 aa18.81■□□□□ 0.6
USHBP1-203ENST00000431146 OPLAHO14841 1288 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 COBLO75128 1261 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 ASNSP08243 561 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 HOXA13P31271 388 aaPredicted RBP18.8■□□□□ 0.6
USHBP1-203ENST00000431146 ORC2Q13416 577 aaPredicted RBP18.8■□□□□ 0.6
USHBP1-203ENST00000431146 DGKZQ13574 1117 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 PPP4R3AQ6IN85 833 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 ZNF341Q9BYN7 854 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 DEFB129Q9H1M3 183 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 NFE2L3Q9Y4A8 694 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
USHBP1-203ENST00000431146 NBPF12Q5TAG4 269 aaPredicted RBP18.8■□□□□ 0.6
USHBP1-203ENST00000431146 ARHGAP27Q6ZUM4 889 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 LRWD1Q9UFC0 647 aa18.8■□□□□ 0.6
USHBP1-203ENST00000431146 RPN1P04843 607 aaKnown RBP18.79■□□□□ 0.6
USHBP1-203ENST00000431146 DHX8Q14562 1220 aaKnown RBP18.79■□□□□ 0.6
USHBP1-203ENST00000431146 PTPN21Q16825 1174 aa18.79■□□□□ 0.6
USHBP1-203ENST00000431146 HAS1Q92839 578 aa18.79■□□□□ 0.6
USHBP1-203ENST00000431146 FEZ1Q99689 392 aa18.79■□□□□ 0.6
USHBP1-203ENST00000431146 FZD1Q9UP38 647 aa18.79■□□□□ 0.6
USHBP1-203ENST00000431146 SERPINC1P01008 464 aa18.79■□□□□ 0.6
USHBP1-203ENST00000431146 GLT8D2Q9H1C3 349 aa18.79■□□□□ 0.6
USHBP1-203ENST00000431146 SAMSN1Q9NSI8 373 aaKnown RBP18.79■□□□□ 0.6
USHBP1-203ENST00000431146 PPP1R3GB7ZBB8 358 aa18.78■□□□□ 0.6
USHBP1-203ENST00000431146 TPM3P06753 285 aa18.78■□□□□ 0.6
USHBP1-203ENST00000431146 FXR2P51116 673 aaKnown RBP eCLIP18.78■□□□□ 0.6
USHBP1-203ENST00000431146 TMEM266Q2M3C6 531 aa18.78■□□□□ 0.6
USHBP1-203ENST00000431146 ENOX1Q8TC92 643 aaKnown RBP18.78■□□□□ 0.6
USHBP1-203ENST00000431146 TRPM4Q8TD43 1214 aa18.78■□□□□ 0.6
USHBP1-203ENST00000431146 CACTINQ8WUQ7 758 aaKnown RBP18.78■□□□□ 0.6
USHBP1-203ENST00000431146 NUDT12Q9BQG2 462 aa18.78■□□□□ 0.6
USHBP1-203ENST00000431146 MAPK8IP1Q9UQF2 711 aa18.78■□□□□ 0.6
USHBP1-203ENST00000431146 MARCH6O60337 910 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 UBASH3AP57075 661 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 TBC1D5Q92609 795 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 NAP1L5Q96NT1 182 aaPredicted RBP18.77■□□□□ 0.6
USHBP1-203ENST00000431146 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 KBTBD4Q9NVX7 518 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 CTNND2Q9UQB3 1225 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 GDAQ9Y2T3 454 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 INPP5BP32019 993 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 GRB10Q13322 594 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 ANGEL2Q5VTE6 544 aaKnown RBP18.77■□□□□ 0.6
USHBP1-203ENST00000431146 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 CHURC1Q8WUH1 139 aa18.77■□□□□ 0.6
USHBP1-203ENST00000431146 SYNRGQ9UMZ2 1314 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 SPDYE3A6NKU9 549 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 H7C1D1 291 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 ERCC5P28715 1186 aaPredicted RBP18.76■□□□□ 0.59
USHBP1-203ENST00000431146 MMP14P50281 582 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 ARHGAP4P98171 946 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 AP3B2Q13367 1082 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 FCHSD1Q86WN1 690 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 CALML4Q96GE6 196 aa18.76■□□□□ 0.59
USHBP1-203ENST00000431146 GCFC2P16383 781 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms