RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 KCNK18Q7Z418 384 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 DHX36Q9H2U1 1008 aaKnown RBP11.41□□□□□ -0.58
RPE-206ENST00000429921 E4F1Q66K89 784 aaPredicted RBP11.41□□□□□ -0.58
RPE-206ENST00000429921 GALNT17Q6IS24 598 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 TATDN1Q6P1N9 297 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 GSDMAQ96QA5 445 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 LRWD1Q9UFC0 647 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 DACH1Q9UI36 760 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 SSBP05455 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPE-206ENST00000429921 CXCL9Q07325 125 aa11.4□□□□□ -0.58
RPE-206ENST00000429921 PRAMEF18Q5VWM3 479 aa11.4□□□□□ -0.58
RPE-206ENST00000429921 SPATA1Q5VX52 437 aa11.4□□□□□ -0.58
RPE-206ENST00000429921 OGFOD1Q8N543 542 aa11.4□□□□□ -0.58
RPE-206ENST00000429921 CCDC17Q96LX7 622 aa11.4□□□□□ -0.58
RPE-206ENST00000429921 EHD4Q9H223 541 aa11.4□□□□□ -0.58
RPE-206ENST00000429921 RIC8AQ9NPQ8 531 aa11.4□□□□□ -0.58
RPE-206ENST00000429921 HMGB2P26583 209 aaKnown RBP11.4□□□□□ -0.59
RPE-206ENST00000429921 ASIC1P78348 528 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 MTF1Q14872 753 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 FAM83BQ5T0W9 1011 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 FCHSD1Q86WN1 690 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 ELOA2Q8IYF1 753 aaPredicted RBP11.4□□□□□ -0.59
RPE-206ENST00000429921 CCAR2Q8N163 923 aaKnown RBP11.4□□□□□ -0.59
RPE-206ENST00000429921 TRIML1Q8N9V2 468 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 CUL5Q93034 780 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 DESI2Q9BSY9 194 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 SLC39A2Q9NP94 309 aa11.4□□□□□ -0.59
RPE-206ENST00000429921 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.4□□□□□ -0.59
RPE-206ENST00000429921 DDX25Q9UHL0 483 aaKnown RBP11.4□□□□□ -0.59
RPE-206ENST00000429921 V9GYY5 206 aaPredicted RBP11.4□□□□□ -0.59
RPE-206ENST00000429921 A0A0U1RQJ8 604 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 CBFA2T2O43439 604 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 KLRC4O43908 158 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 STK4Q13043 487 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 GRB10Q13322 594 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 LRRC41Q15345 812 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
RPE-206ENST00000429921 TMEM179Q6ZVK1 233 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 APTXQ7Z2E3 356 aaKnown RBP11.39□□□□□ -0.59
RPE-206ENST00000429921 SUPT20HQ8NEM7 779 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 CYP2W1Q8TAV3 490 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 ATRIPQ8WXE1 791 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 HAS1Q92839 578 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 CCDC34Q96HJ3 373 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 PNMA5Q96PV4 448 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 FBXO28Q9NVF7 368 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 TBC1D7Q9P0N9 293 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 CNTNAP1P78357 1384 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 NPHP3-ACAD11A0A0J9YXS1 232 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 PSDA5PKW4 1024 aaPredicted RBP11.39□□□□□ -0.59
RPE-206ENST00000429921 RNF225M0QZC1 329 aaPredicted RBP11.39□□□□□ -0.59
RPE-206ENST00000429921 GSDMDP57764 484 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 RASSF7Q02833 373 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 PDE4DQ08499 809 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 NIM1KQ8IY84 436 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 TMOD2Q9NZR1 351 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 NYAP2Q9P242 653 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 IMPACTQ9P2X3 320 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 BCS1LQ9Y276 419 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 GJA3Q9Y6H8 435 aa11.39□□□□□ -0.59
RPE-206ENST00000429921 ZNF646O15015 1829 aaPredicted RBP11.38□□□□□ -0.59
RPE-206ENST00000429921 VIL1P09327 827 aaKnown RBP11.38□□□□□ -0.59
RPE-206ENST00000429921 IDEP14735 1019 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 ERCC5P28715 1186 aaPredicted RBP11.38□□□□□ -0.59
RPE-206ENST00000429921 HDLBPQ00341 1268 aaKnown RBP11.38□□□□□ -0.59
RPE-206ENST00000429921 RBL2Q08999 1139 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 PAK1Q13153 545 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 NR1I3Q14994 352 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 R3HDM1Q15032 1099 aaKnown RBP11.38□□□□□ -0.59
RPE-206ENST00000429921 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
RPE-206ENST00000429921 SAMD7Q7Z3H4 446 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 RTKN2Q8IZC4 609 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 MYH7BA7E2Y1 1941 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 MEIS1O00470 390 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 BMP3P12645 472 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 SMARCA1P28370 1054 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 MRPL12P52815 198 aaKnown RBP11.38□□□□□ -0.59
RPE-206ENST00000429921 KRT31Q15323 416 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 PTPN14Q15678 1187 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 PRR16Q569H4 304 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 CDK5RAP3Q96JB5 506 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 GMLQ99445 158 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 CCSER1Q9C0I3 900 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 BLOC1S4Q9NUP1 217 aa11.38□□□□□ -0.59
RPE-206ENST00000429921 MYMKA6NI61 221 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 E9PMD0 336 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 MEIS2O14770 477 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 CLK2P49760 499 aaKnown RBP11.37□□□□□ -0.59
RPE-206ENST00000429921 FKBP1AP62942 108 aaKnown RBP11.37□□□□□ -0.59
RPE-206ENST00000429921 SYDE2Q5VT97 1194 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 TOGARAM2Q6ZUX3 1019 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 MKL1Q969V6 931 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 MRIQ9BWK5 157 aa11.37□□□□□ -0.59
RPE-206ENST00000429921 SRRTQ9BXP5 876 aaKnown RBP11.37□□□□□ -0.59
RPE-206ENST00000429921 BCAS3Q9H6U6 928 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms