RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 PRLRP16471 622 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 ERCC3P19447 782 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 PEX19P40855 299 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 AKNAD1Q5T1N1 836 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 PPP4R3AQ6IN85 833 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 MFSD6Q6ZSS7 791 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 MTMR8Q96EF0 704 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 ALS2CR12Q96Q35 445 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 TMBIM4Q9HC24 238 aa12.28□□□□□ -0.44
SEMA4D-209ENST00000429836 PHF20L1A8MW92 1017 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 ADAMTS3O15072 1205 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 GCKP35557 465 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 INHBEP58166 350 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 MYO1EQ12965 1108 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 GLE1Q53GS7 698 aaKnown RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 CD302Q8IX05 232 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 CSGALNACT2Q8N6G5 542 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 HVCN1Q96D96 273 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 PHF20Q9BVI0 1012 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 RMND1Q9NWS8 449 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 CNOT8Q9UFF9 292 aaKnown RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 PACSIN2Q9UNF0 486 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 TRAPPC3O43617 180 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 AKR1B10O60218 316 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 MBD4O95243 580 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 GCP02774 474 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 CSB-PGBD3P0DP91 1061 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 MTIF2P46199 727 aaKnown RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 RASSF7Q02833 373 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 KLHDC7AQ5VTJ3 777 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 HIBCHQ6NVY1 386 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 CCDC50Q8IVM0 306 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 KCNH5Q8NCM2 988 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 NOD2Q9HC29 1040 aa12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 FAM207AQ9NSI2 230 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-209ENST00000429836 MYH6P13533 1939 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 ERICH2A1L162 156 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 GOLGA6L10A6NI86 522 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 PP2D1A8MPX8 630 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 SMIM22K7EJ46 135 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 PLEKHA8P1O95397 391 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 STAT6P42226 847 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 ZC3H6P61129 1189 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 ELF3P78545 371 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 HLTFQ14527 1009 aaKnown RBP eCLIP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 ODF2Q5BJF6 829 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 TTI2Q6NXR4 508 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 KLHL7Q8IXQ5 586 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 CACNA2D3Q8IZS8 1091 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 CNOT6LQ96LI5 555 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 DUSP9Q99956 384 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 THAP9Q9H5L6 903 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 KIF9Q9HAQ2 790 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 PKD1L3Q7Z443 1732 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 PARP4Q9UKK3 1724 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 DCDC2CA8MYV0 355 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 FTCDO95954 541 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 MAGEA1P43355 309 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 SARNPP82979 210 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 PPP1R7Q15435 360 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 CDC37Q16543 378 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 CFAP221Q4G0U5 840 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 MSL1Q68DK7 614 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 PIK3AP1Q6ZUJ8 805 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 NOC3LQ8WTT2 800 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 NSMCE1Q8WV22 266 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 RAPGEF5Q92565 580 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 NOC4LQ9BVI4 516 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 SLC12A6Q9UHW9 1150 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 L3MBTL1Q9Y468 752 aa12.26□□□□□ -0.45
SEMA4D-209ENST00000429836 USP54Q70EL1 1684 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 MGRN1O60291 552 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 MYZAPP0CAP1 466 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 PHKG2P15735 406 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 SLC8A1P32418 973 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 GFPT1Q06210 699 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 XRCC4Q13426 336 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 C11orf91Q3C1V1 193 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 DDX42Q86XP3 938 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 MREGQ8N565 214 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 MAGEC3Q8TD91 643 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 LPIN2Q92539 896 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 SPDL1Q96EA4 605 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 TMEM94Q12767 1356 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 TCRBV5S4A2TA0A5A2 114 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 RAD51CO43502 376 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 XBP1P17861 261 aa12.25□□□□□ -0.45
SEMA4D-209ENST00000429836 HSD17B3P37058 310 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms