RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 FERMT1Q9BQL6 677 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 CAAP1Q9H8G2 361 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 FHOD1Q9Y613 1164 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 POTEFA5A3E0 1075 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 PPP1R37O75864 691 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 POTEIP0CG38 1075 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 IL9RQ01113 521 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 POTEEQ6S8J3 1075 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 XAGE3Q8WTP9 111 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 DNAJC17Q9NVM6 304 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 DIS3Q9Y2L1 958 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 RANBP1P43487 201 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 KRT27Q7Z3Y8 459 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 LINS1Q8NG48 757 aa8.22□□□□□ -1.09
SYNPO2-202ENST00000429713 ANKRD62A6NC57 917 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 CTNNA1P35221 906 aaKnown RBP8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 SPDYCQ5MJ68 293 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 ZNF652Q9Y2D9 606 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 STK24Q9Y6E0 443 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 MGEA5O60502 916 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 PDE4BQ07343 736 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 TCERG1LQ5VWI1 586 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 PROSER2Q86WR7 435 aaPredicted RBP8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 ENOX1Q8TC92 643 aaKnown RBP8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 KLHL29Q96CT2 875 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 IFT172Q9UG01 1749 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 IL15P40933 162 aaPredicted RBP8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC88AQ3V6T2 1871 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 CCDC93Q567U6 631 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 ANKRD20A3Q5VUR7 823 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 STXBP4Q6ZWJ1 553 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 COPS6Q7L5N1 327 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 OR8K1Q8NGG5 319 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 LRRC8CQ8TDW0 803 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 CHAMP1Q96JM3 812 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 LCMT1Q9UIC8 334 aa8.21□□□□□ -1.09
SYNPO2-202ENST00000429713 GMNCA6NCL1 334 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 E9PMD0 336 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 RGS2P41220 211 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ARPC4P59998 168 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 FOXP3Q9BZS1 431 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 TTKP33981 857 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ANKRD20A4Q4UJ75 823 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ANKRD20A2Q5SQ80 823 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ANKRD20A1Q5TYW2 823 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 UNC13DQ70J99 1090 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 GID8Q9NWU2 228 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ATXN10Q9UBB4 475 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 MYO3AQ8NEV4 1616 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 KRT6CP48668 564 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ANO1Q5XXA6 986 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 MAP7D3Q8IWC1 876 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 CD209Q9NNX6 404 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 RAB21Q9UL25 225 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 JAK2O60674 1132 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 HSPA8P11142 646 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 GSTA3Q16772 222 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 AFAP1L2Q8N4X5 818 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ATP6V1G3Q96LB4 118 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ZSWIM6Q9HCJ5 1215 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 ERCC6L2Q5T890 1561 aa8.21□□□□□ -1.1
SYNPO2-202ENST00000429713 B4DLN1 442 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 SKIV2L2P42285 1042 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 TEDDM1Q5T9Z0 273 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 LGSNQ5TDP6 509 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 HDAC7Q8WUI4 952 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 PALD1Q9ULE6 856 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 CARD8Q9Y2G2 431 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 SYCE1LA8MT33 242 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 GNPTABQ3T906 1256 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 RFC1P35251 1148 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 CAV1Q03135 178 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 XPO4Q9C0E2 1151 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 PRDM11Q9NQV5 511 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 EVPLQ92817 2033 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 CCDC159P0C7I6 412 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 ZNF76P36508 570 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 ACTN3Q08043 901 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 AGBL2Q5U5Z8 902 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 PCNX4Q63HM2 1172 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 NEK10Q6ZWH5 1172 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 ZNF444Q8N0Y2 327 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 ESR2Q92731 530 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 TSPAN18Q96SJ8 248 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 PHF23Q9BUL5 403 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 C15orf41Q9Y2V0 281 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 RNF113AO15541 343 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 BASP1P80723 227 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 SCRN1Q12765 414 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 SND1Q7KZF4 910 aaKnown RBP eCLIP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 CCDC89Q8N998 374 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 MKL1Q969V6 931 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 TRMT112Q9UI30 125 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 RGPD8O14715 1765 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 MAP1BP46821 2468 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 TRIM75PA6NK02 468 aa8.2□□□□□ -1.1
SYNPO2-202ENST00000429713 PARNO95453 639 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms