RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ZNF76P36508 570 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 IFT88Q13099 833 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 NNTQ13423 1086 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 DDB1Q16531 1140 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 CCDC121Q6ZUS5 278 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 TADA2BQ86TJ2 420 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 REXO1Q8N1G1 1221 aaKnown RBP15.22■□□□□ 0.03
SGMS1-203ENST00000429490 NWD1Q149M9 1564 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 TCRBV5S4A2TA0A5A2 114 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 BACH1O14867 736 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 CRKLP46109 303 aaKnown RBP15.22■□□□□ 0.03
SGMS1-203ENST00000429490 TRAPPC10P48553 1259 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 PAK2Q13177 524 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 PKN1Q16512 942 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 FBXW10Q5XX13 1052 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 ICE2Q659A1 982 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 UHMK1Q8TAS1 419 aaKnown RBP15.22■□□□□ 0.03
SGMS1-203ENST00000429490 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 SELENOSQ9BQE4 189 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 NDST4Q9H3R1 872 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 TROAPQ12815 778 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 PARP10Q53GL7 1025 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 SFMBT2Q5VUG0 894 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 VPS36Q86VN1 386 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 HDAC7Q8WUI4 952 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 CYP19A1P11511 503 aaPredicted RBP15.21■□□□□ 0.03
SGMS1-203ENST00000429490 TNNC1P63316 161 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 ADSSL1Q8N142 457 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 SPATA4Q8NEY3 305 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 TBCKQ8TEA7 893 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 TBC1D5Q92609 795 aa15.21■□□□□ 0.03
SGMS1-203ENST00000429490 LRRC53A6NM62 1247 aa15.21■□□□□ 0.02
SGMS1-203ENST00000429490 ARHGAP25P42331 645 aa15.21■□□□□ 0.02
SGMS1-203ENST00000429490 PFKFB3Q16875 520 aaPredicted RBP15.21■□□□□ 0.02
SGMS1-203ENST00000429490 ERFEQ4G0M1 354 aa15.21■□□□□ 0.02
SGMS1-203ENST00000429490 NT5DC1Q5TFE4 455 aa15.21■□□□□ 0.02
SGMS1-203ENST00000429490 EFCAB13Q8IY85 973 aa15.21■□□□□ 0.02
SGMS1-203ENST00000429490 DHTKD1Q96HY7 919 aaPredicted RBP15.21■□□□□ 0.02
SGMS1-203ENST00000429490 DPH5Q9H2P9 285 aa15.21■□□□□ 0.02
SGMS1-203ENST00000429490 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.029e-7■■■■■ 87.5
SGMS1-203ENST00000429490 CAPN11Q9UMQ6 739 aa15.21■□□□□ 0.02
SGMS1-203ENST00000429490 A0A087WUV0 522 aaPredicted RBP15.2■□□□□ 0.02
SGMS1-203ENST00000429490 TMEM110-MUSTN1A8MSY1 372 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 RPS8P62241 208 aaKnown RBP15.2■□□□□ 0.02
SGMS1-203ENST00000429490 CCNI2Q6ZMN8 369 aaPredicted RBP15.2■□□□□ 0.02
SGMS1-203ENST00000429490 B4GALNT4Q76KP1 1039 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 NEK8Q86SG6 692 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 CCDC155Q8N6L0 562 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 COA7Q96BR5 231 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 GPR101Q96P66 508 aaPredicted RBP15.2■□□□□ 0.02
SGMS1-203ENST00000429490 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 SPATA31A3Q5VYP0 1347 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 KRT13P13646 458 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 IL6STP40189 918 aaPredicted RBP15.2■□□□□ 0.02
SGMS1-203ENST00000429490 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
SGMS1-203ENST00000429490 DCP1AQ9NPI6 582 aaPredicted RBP15.2■□□□□ 0.02
SGMS1-203ENST00000429490 PSD3Q9NYI0 1048 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 STIM2Q9P246 746 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 TACC3Q9Y6A5 838 aa15.2■□□□□ 0.02
SGMS1-203ENST00000429490 POTEMA6NI47 508 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 HERVK_113P62684 666 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 LLGL1Q15334 1064 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 LRRC47Q8N1G4 583 aaKnown RBP15.19■□□□□ 0.02
SGMS1-203ENST00000429490 OSBPL9Q96SU4 736 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 RAB21Q9UL25 225 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 CAPN6Q9Y6Q1 641 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 FAM237AA0A1B0GTK4 181 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 EPHB4P54760 987 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 RPS6KA1Q15418 735 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 KRT25Q7Z3Z0 450 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 CCDC170Q8IYT3 715 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 CABS1Q96KC9 395 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 PLA2G12BQ9BX93 195 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 GOLGA8KD6RF30 607 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 MYBL2P10244 700 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 GUCY1A3Q02108 690 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 GBP6Q6ZN66 633 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 CCDC25Q86WR0 208 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 FAM133AQ8N9E0 248 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 SLAIN2Q9P270 581 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 CDHR2Q9BYE9 1310 aa15.19■□□□□ 0.02
SGMS1-203ENST00000429490 CTNNA1P35221 906 aaKnown RBP15.18■□□□□ 0.02
SGMS1-203ENST00000429490 PLS1Q14651 629 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 KRT71Q3SY84 523 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
SGMS1-203ENST00000429490 EYA3Q99504 573 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 AP1M1Q9BXS5 423 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 ARPP21Q9UBL0 812 aaPredicted RBP15.18■□□□□ 0.02
SGMS1-203ENST00000429490 ITIH6Q6UXX5 1313 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 LDHCP07864 332 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 ABCB4P21439 1286 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 IRAK1P51617 712 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 ASIC2Q16515 512 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 ARL6IP4Q66PJ3 421 aaKnown RBP15.18■□□□□ 0.02
SGMS1-203ENST00000429490 GOLPH3Q9H4A6 298 aa15.18■□□□□ 0.02
SGMS1-203ENST00000429490 FMN2Q9NZ56 1722 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms