RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 POLR2FP61218 127 aaKnown RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 RNASELQ05823 741 aaKnown RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 ASPHQ12797 758 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 TYW5A2RUC4 315 aaKnown RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 HSPA6P17066 643 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 CLNS1AP54105 237 aaKnown RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 BSPRYQ5W0U4 402 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 RPS6KC1Q96S38 1066 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 EVI5O60447 810 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 PPP2R5CQ13362 524 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 TTLL7Q6ZT98 887 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 KDM5AP29375 1690 aaKnown RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 TMEM232C9JQI7 657 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 MYL7Q01449 175 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 RBBP5Q15291 538 aaKnown RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 NBPF3Q9H094 633 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 RNF14Q9UBS8 474 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 BAG5Q9UL15 447 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 EPN1Q9Y6I3 576 aaPredicted RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 NDUFB9Q9Y6M9 179 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 FRMPD2Q68DX3 1309 aaPredicted RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 ANKRD42Q8N9B4 389 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 NACC1Q96RE7 527 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 TMEM206Q9H813 350 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 TMEM63CQ9P1W3 806 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 PCDHA7Q9UN72 937 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 PCDHA4Q9UN74 947 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 MYO1FO00160 1098 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 PDIA3P30101 505 aaKnown RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 ADD1P35611 737 aaKnown RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 PIK3CAP42336 1068 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 BCAMP50895 628 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 PTGDRQ13258 359 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 ZMYM1Q5SVZ6 1142 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 GBP7Q8N8V2 638 aaPredicted RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 MAP4K1Q92918 833 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 LRRIQ4A6NIV6 560 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 PSMC2P35998 433 aaKnown RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 SLC39A14Q15043 492 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 DBN1Q16643 649 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 ODR4Q5SWX8 454 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 SLC7A3Q8WY07 619 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 POMGNT1Q8WZA1 660 aa13.96□□□□□ -0.17
LDB3-205ENST00000429277 LARP4BQ92615 738 aaKnown RBP13.96□□□□□ -0.17
LDB3-205ENST00000429277 TTLL1O95922 423 aa13.96□□□□□ -0.18
LDB3-205ENST00000429277 CCHCR1Q8TD31 782 aa13.96□□□□□ -0.18
LDB3-205ENST00000429277 SDR42E1Q8WUS8 393 aa13.96□□□□□ -0.18
LDB3-205ENST00000429277 ANKRD36BP1Q96IX9 119 aa13.96□□□□□ -0.18
LDB3-205ENST00000429277 TRIM56Q9BRZ2 755 aaKnown RBP13.96□□□□□ -0.18
LDB3-205ENST00000429277 DHX36Q9H2U1 1008 aaKnown RBP13.96□□□□□ -0.18
LDB3-205ENST00000429277 BTBD18B2RXH4 712 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 IKBKBO14920 756 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 BBOX1O75936 387 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 KRT10P13645 584 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 PTH1RQ03431 593 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 LRCH2Q5VUJ6 765 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 CACTINQ8WUQ7 758 aaKnown RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 OSBPL3Q9H4L5 887 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 KANSL2Q9H9L4 492 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 POLR3EQ9NVU0 708 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 ATP8B1O43520 1251 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 HIP1RO75146 1068 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 ALCAMQ13740 583 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 GADL1Q6ZQY3 521 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 SYMPKQ92797 1274 aaKnown RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 ACCSQ96QU6 501 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 MGEA5O60502 916 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 KPNA2P52292 529 aaKnown RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 POLA2Q14181 598 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 EAPPQ56P03 285 aaPredicted RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 C10orf76Q5T2E6 689 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 NCAPG2Q86XI2 1143 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 ZNF148Q9UQR1 794 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 BCS1LQ9Y276 419 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 ESYT2A0FGR8 921 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 TXNDC9O14530 226 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 S100BP04271 92 aaPredicted RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 DLATP10515 647 aaKnown RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 OSBPP22059 807 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 SURF1Q15526 300 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 SUPT20HL1Q3ZLR7 823 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 CCDC93Q567U6 631 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 SUGCTQ9HAC7 445 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 JRKLQ9Y4A0 524 aa13.95□□□□□ -0.18
LDB3-205ENST00000429277 RPAP1Q9BWH6 1393 aaPredicted RBP13.95□□□□□ -0.18
LDB3-205ENST00000429277 GSTA1P08263 222 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 GSTA2P09210 222 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 KIAA0825Q8IV33 1275 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 SDCCAG3Q96C92 435 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 YEATS2Q9ULM3 1422 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 TCP10L2B9ZVM9 353 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 STMN1P16949 149 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 ERCC3P19447 782 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 CDC37Q16543 378 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms