RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ARID2Q68CP9 1835 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 SLC37A4O43826 429 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 ZBED4O75132 1171 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 CFBP00751 764 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 HSPA1AP0DMV8 641 aaKnown RBP10.13□□□□□ -0.79
SMC6-204ENST00000428868 HSPA1BP0DMV9 641 aaKnown RBP10.13□□□□□ -0.79
SMC6-204ENST00000428868 ME1P48163 572 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 FKBP1BP68106 108 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 UBXN2AP68543 259 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 COG2Q14746 738 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 LETM2Q2VYF4 491 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 SPECC1Q5M775 1068 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 CAVIN1Q6NZI2 390 aaKnown RBP10.13□□□□□ -0.79
SMC6-204ENST00000428868 SLC30A10Q6XR72 485 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 BICD2Q8TD16 824 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 MS4A4AQ96JQ5 239 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 PURBQ96QR8 312 aaKnown RBP10.13□□□□□ -0.79
SMC6-204ENST00000428868 ANP32EQ9BTT0 268 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 ASCC2Q9H1I8 757 aaPredicted RBP10.13□□□□□ -0.79
SMC6-204ENST00000428868 BTBD7Q9P203 1132 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
SMC6-204ENST00000428868 MYH11P35749 1972 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 LOXHD1Q8IVV2 1947 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 CCNT1O60563 726 aaKnown RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 PPP6R2O75170 966 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 SLC34A2O95436 690 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 PTMSP20962 102 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 HOXA7P31268 230 aaPredicted RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 TRAPPC10P48553 1259 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 MRPL12P52815 198 aaKnown RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 HUNKP57058 714 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 ATP2C1P98194 919 aaPredicted RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 PTGDRQ13258 359 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 CSPP1Q1MSJ5 1256 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 SPRYD7Q5W111 196 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 SNRNP48Q6IEG0 339 aaKnown RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 SHC4Q6S5L8 630 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 USP49Q70CQ1 688 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 NEK8Q86SG6 692 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 RASAL3Q86YV0 1011 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 FSIP1Q8NA03 581 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 KCNG4Q8TDN1 519 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 CRYGNQ8WXF5 182 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 BRI3BPQ8WY22 251 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 GJA10Q969M2 543 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 UIMC1Q96RL1 719 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 RNF146Q9NTX7 359 aa10.12□□□□□ -0.79
SMC6-204ENST00000428868 MRPL11Q9Y3B7 192 aaKnown RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 MYH9P35579 1960 aaKnown RBP10.12□□□□□ -0.79
SMC6-204ENST00000428868 MYPNQ86TC9 1320 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 CCL15-CCL14A0A0B4J2E2 113 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 A0A1B0GVL5 298 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 BTBD19C9JJ37 291 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 NR1I2O75469 434 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 MBD3O95983 291 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 PTPREP23469 700 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 HSD17B4P51659 736 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 HERVK_113P62684 666 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 SNAPC2Q13487 334 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 CCL15Q16663 113 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 SKOR2Q2VWA4 1001 aaPredicted RBP10.11□□□□□ -0.79
SMC6-204ENST00000428868 ADALQ6DHV7 355 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 LBX2Q6XYB7 198 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 IL31RAQ8NI17 732 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 PAGR1Q9BTK6 254 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
SMC6-204ENST00000428868 PCNTO95613 3336 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 A0A087X0B3 334 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 A0A1W2PQ27 194 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 A0A1W2PQ64 194 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 A0A1W2PQD8 194 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 VWA3AA6NCI4 1184 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 UNCXA6NJT0 531 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 GCOM1H8Y6P7 765 aaPredicted RBP10.1□□□□□ -0.79
SMC6-204ENST00000428868 CUTAO60888 179 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 POLR2MP0CAP2 368 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 CYP2C8P10632 490 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 SREBF1P36956 1147 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 NDUFA8P51970 172 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 IRX3P78415 501 aaPredicted RBP10.1□□□□□ -0.79
SMC6-204ENST00000428868 ARHGAP4P98171 946 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 GHRHRQ02643 423 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 AP3B2Q13367 1082 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 SNW1Q13573 536 aaKnown RBP10.1□□□□□ -0.79
SMC6-204ENST00000428868 PLS1Q14651 629 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 RESP18Q5W5W9 173 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 FAM43AQ8N2R8 423 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
SMC6-204ENST00000428868 SMC1BQ8NDV3 1235 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 ENGASEQ8NFI3 743 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 MRPS27Q92552 414 aaKnown RBP10.1□□□□□ -0.79
SMC6-204ENST00000428868 PTPN18Q99952 460 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 CSRNP2Q9H175 543 aa10.1□□□□□ -0.79
SMC6-204ENST00000428868 CTDP1Q9Y5B0 961 aaPredicted RBP10.1□□□□□ -0.79
SMC6-204ENST00000428868 SRPRBQ9Y5M8 271 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms