RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 TEX11Q8IYF3 940 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 THAP9Q9H5L6 903 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 SNAP23O00161 211 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 XBP1P17861 261 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 ERCC3P19447 782 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 ALX1Q15699 326 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 ANKRD20A8PQ5CZ79 823 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 LCORLQ8N3X6 602 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 CNOT6LQ96LI5 555 aaKnown RBP18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 ORAI2Q96SN7 254 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 KRT12Q99456 494 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 FAM207AQ9NSI2 230 aaPredicted RBP18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 SOS2Q07890 1332 aaPredicted RBP18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 ABCC12Q96J65 1359 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 MTIF2P46199 727 aaKnown RBP18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 PAK2Q13177 524 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 ACCSLQ4AC99 568 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 TTLL11Q8NHH1 800 aa18.19■□□□□ 0.5
RHBDF1-204ENST00000428730 SCN11AQ9UI33 1791 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 TNKSO95271 1327 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 PRLRP16471 622 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 MRPL12P52815 198 aaKnown RBP18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 FUT2Q10981 343 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 MIIPQ5JXC2 388 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 HELBQ8NG08 1087 aaPredicted RBP18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 SGSM3Q96HU1 749 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 ALS2CR12Q96Q35 445 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 RIPOR2Q9Y4F9 1068 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 BMP15O95972 392 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 RASSF7Q02833 373 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 KLHDC7AQ5VTJ3 777 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 MIGA1Q8NAN2 632 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 RASSF8Q8NHQ8 419 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 NOC4LQ9BVI4 516 aaKnown RBP18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 LEMD3Q9Y2U8 911 aa18.18■□□□□ 0.5
RHBDF1-204ENST00000428730 PSMA7O14818 248 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 KLRC4O43908 158 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 AKR1B10O60218 316 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 BYSLQ13895 437 aaKnown RBP18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 LRRC15Q8TF66 581 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 TBC1D31Q96DN5 1066 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 SCTRP47872 440 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 NAA25Q14CX7 972 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 EMC10Q5UCC4 262 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 NUP58Q9BVL2 599 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 GREM2Q9H772 168 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 BCCIPQ9P287 314 aaKnown RBP eCLIP18.17■□□□□ 0.5
RHBDF1-204ENST00000428730 HMGB1P1B2RPK0 211 aaPredicted RBP18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 FTCDO95954 541 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 ANKRD40Q6AI12 368 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 CHADLQ6NUI6 762 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 TLDC1Q6P9B6 456 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 DISP2A7MBM2 1401 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 GMNCA6NCL1 334 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 MINDY4BA8MYZ0 360 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 EZRP15311 586 aaKnown RBP18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 SLC1A4P43007 532 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 CD302Q8IX05 232 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 LPIN2Q92539 896 aa18.16■□□□□ 0.5
RHBDF1-204ENST00000428730 PHRF1Q9P1Y6 1649 aaKnown RBP18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 ITGA6P23229 1130 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 MAGEA1P43355 309 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 CFAP221Q4G0U5 840 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 HPS3Q969F9 1004 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 SEC16BQ96JE7 1060 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 ACTR5Q9H9F9 607 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 TMBIM4Q9HC24 238 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 CNOT8Q9UFF9 292 aaKnown RBP18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 ANKRD18BA2A2Z9 1011 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 PPP1R12AO14974 1030 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 CRYMQ14894 314 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 SEC23AQ15436 765 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 KLHL7Q8IXQ5 586 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 RETREG2Q8NC44 543 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 DISC1Q9NRI5 854 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 PLAGL2Q9UPG8 496 aa18.15■□□□□ 0.5
RHBDF1-204ENST00000428730 DCDC2CA8MYV0 355 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 RAD51CO43502 376 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 RTN2O75298 545 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 DRP2Q13474 957 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 GLE1Q53GS7 698 aaKnown RBP18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 PPP4R3AQ6IN85 833 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 MREGQ8N565 214 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 ENAHQ8N8S7 591 aaPredicted RBP18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 SLC12A6Q9UHW9 1150 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 GGA2Q9UJY4 613 aa18.14■□□□□ 0.5
RHBDF1-204ENST00000428730 MYH6P13533 1939 aa18.14■□□□□ 0.49
RHBDF1-204ENST00000428730 LRRC53A6NM62 1247 aa18.14■□□□□ 0.49
RHBDF1-204ENST00000428730 PHF20L1A8MW92 1017 aa18.14■□□□□ 0.49
RHBDF1-204ENST00000428730 TRAPPC3O43617 180 aa18.14■□□□□ 0.49
RHBDF1-204ENST00000428730 CCNHP51946 323 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms