RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PXYLP1Q8TE99 480 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 MGAMO43451 1857 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 CDKL5O76039 1030 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 HOXC6P09630 235 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 IFNAR1P17181 557 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 FUT2Q10981 343 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 CUL5Q93034 780 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 DOCK3Q8IZD9 2030 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 DNAJC25-GNG10A0A024R161 153 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 SOWAHBA6NEL2 793 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
SGCE-204ENST00000428696 PRPF3O43395 683 aaKnown RBP16.78■□□□□ 0.28
SGCE-204ENST00000428696 CAPN15O75808 1086 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
SGCE-204ENST00000428696 MTFR1Q15390 333 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 WWC2Q6AWC2 1192 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 CCDC83Q8IWF9 413 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 SMARCC2Q8TAQ2 1214 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 RNF208Q9H0X6 261 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 PSTPIP2Q9H939 334 aa16.78■□□□□ 0.28
SGCE-204ENST00000428696 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
SGCE-204ENST00000428696 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
SGCE-204ENST00000428696 CCL5P13501 91 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 SCG2P13521 617 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 CACNB2Q08289 660 aaPredicted RBP16.77■□□□□ 0.27
SGCE-204ENST00000428696 NTRK3Q16288 839 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 FAM133AQ8N9E0 248 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 SYTL5Q8TDW5 730 aaPredicted RBP16.77■□□□□ 0.27
SGCE-204ENST00000428696 ZSCAN31Q96LW9 406 aaPredicted RBP16.77■□□□□ 0.27
SGCE-204ENST00000428696 TINF2Q9BSI4 451 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 UNC93B1Q9H1C4 597 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 HMX1Q9NP08 348 aaPredicted RBP16.77■□□□□ 0.27
SGCE-204ENST00000428696 CNPY2Q9Y2B0 182 aa16.77■□□□□ 0.27
SGCE-204ENST00000428696 DIS3Q9Y2L1 958 aaKnown RBP16.77■□□□□ 0.27
SGCE-204ENST00000428696 PFKFB3Q16875 520 aaPredicted RBP16.76■□□□□ 0.27
SGCE-204ENST00000428696 ARHGEF16Q5VV41 709 aa16.76■□□□□ 0.27
SGCE-204ENST00000428696 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
SGCE-204ENST00000428696 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
SGCE-204ENST00000428696 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
SGCE-204ENST00000428696 TAAR1Q96RJ0 339 aa16.76■□□□□ 0.27
SGCE-204ENST00000428696 RMDN3Q96TC7 470 aa16.76■□□□□ 0.27
SGCE-204ENST00000428696 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
SGCE-204ENST00000428696 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
SGCE-204ENST00000428696 SMCO2A6NFE2 343 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 ASB14A6NK59 587 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 STXBP3O00186 592 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 OPLAHO14841 1288 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
SGCE-204ENST00000428696 EIF2AK2P19525 551 aaKnown RBP16.75■□□□□ 0.27
SGCE-204ENST00000428696 CCND3P30281 292 aaPredicted RBP16.75■□□□□ 0.27
SGCE-204ENST00000428696 FOSBP53539 338 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 PDE4DQ08499 809 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 UBE2SQ16763 222 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 USP17L6PQ6QN14 398 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 ARMC5Q96C12 935 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 ZNF333Q96JL9 665 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 MPHOSPH6Q99547 160 aaKnown RBP16.75■□□□□ 0.27
SGCE-204ENST00000428696 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
SGCE-204ENST00000428696 ZHX1Q9UKY1 873 aaPredicted RBP16.75■□□□□ 0.27
SGCE-204ENST00000428696 PLXNB2O15031 1838 aa16.75■□□□□ 0.27
SGCE-204ENST00000428696 NID2Q14112 1375 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 B4DLN1 442 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 MYCLP12524 364 aaPredicted RBP16.74■□□□□ 0.27
SGCE-204ENST00000428696 ADCY7P51828 1080 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 MRPL12P52815 198 aaKnown RBP16.74■□□□□ 0.27
SGCE-204ENST00000428696 NLRP5P59047 1200 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 PKN1Q16512 942 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 ANO1Q5XXA6 986 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.27
SGCE-204ENST00000428696 NSUN6Q8TEA1 469 aaKnown RBP16.74■□□□□ 0.27
SGCE-204ENST00000428696 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.74■□□□□ 0.27
SGCE-204ENST00000428696 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 COL20A1Q9P218 1284 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 CENPFP49454 3210 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 SMCHD1A6NHR9 2005 aa16.74■□□□□ 0.27
SGCE-204ENST00000428696 JAK2O60674 1132 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 CD2BP2O95400 341 aaKnown RBP16.73■□□□□ 0.27
SGCE-204ENST00000428696 DEXIO95424 95 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 CTDNEP1O95476 244 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 TFRCP02786 760 aaKnown RBP16.73■□□□□ 0.27
SGCE-204ENST00000428696 ALDH5A1P51649 535 aaPredicted RBP16.73■□□□□ 0.27
SGCE-204ENST00000428696 HSD17B4P51659 736 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 ARMCX2Q7L311 632 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 ZNF467Q7Z7K2 595 aaPredicted RBP16.73■□□□□ 0.27
SGCE-204ENST00000428696 CCDC12Q8WUD4 166 aaPredicted RBP16.73■□□□□ 0.27
SGCE-204ENST00000428696 ZFP91Q96JP5 570 aaPredicted RBP16.73■□□□□ 0.27
SGCE-204ENST00000428696 AIFM3Q96NN9 605 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 DEFB118Q96PH6 123 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
SGCE-204ENST00000428696 RPTORQ8N122 1335 aa16.73■□□□□ 0.27
SGCE-204ENST00000428696 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
SGCE-204ENST00000428696 MCM2P49736 904 aa16.72■□□□□ 0.27
SGCE-204ENST00000428696 SOX10P56693 466 aa16.72■□□□□ 0.27
SGCE-204ENST00000428696 TYW1BQ6NUM6 668 aa16.72■□□□□ 0.27
SGCE-204ENST00000428696 DNERQ8NFT8 737 aa16.72■□□□□ 0.27
SGCE-204ENST00000428696 FGD4Q96M96 766 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms