RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 DDX49Q9Y6V7 483 aaKnown RBP24.02■■□□□ 1.44
HSPG2-205ENST00000427897 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.01■■□□□ 1.43
HSPG2-205ENST00000427897 PALM3A6NDB9 673 aaPredicted RBP24.01■■□□□ 1.43
HSPG2-205ENST00000427897 DYNC1LI2O43237 492 aaPredicted RBP24.01■■□□□ 1.43
HSPG2-205ENST00000427897 ZEB2O60315 1214 aa24.01■■□□□ 1.43
HSPG2-205ENST00000427897 MAGEA10P43363 369 aaPredicted RBP24.01■■□□□ 1.43
HSPG2-205ENST00000427897 MDM2Q00987 491 aaPredicted RBP24.01■■□□□ 1.43
HSPG2-205ENST00000427897 NECTIN1Q15223 517 aa24.01■■□□□ 1.43
HSPG2-205ENST00000427897 KLHDC9Q8NEP7 349 aa24.01■■□□□ 1.43
HSPG2-205ENST00000427897 CTCFLQ8NI51 663 aaPredicted RBP24.01■■□□□ 1.43
HSPG2-205ENST00000427897 IGDCC4Q8TDY8 1250 aa24.01■■□□□ 1.43
HSPG2-205ENST00000427897 TMEM87BQ96K49 555 aa24.01■■□□□ 1.43
HSPG2-205ENST00000427897 UBE2OQ9C0C9 1292 aaKnown RBP24.01■■□□□ 1.43
HSPG2-205ENST00000427897 PDGFCQ9NRA1 345 aa24.01■■□□□ 1.43
HSPG2-205ENST00000427897 ZBTB5O15062 677 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 CFBP00751 764 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 ASGR1P07306 291 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 KIF5BP33176 963 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 TLK2Q86UE8 772 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 GDF15Q99988 308 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 MTA3Q9BTC8 594 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 MAF1Q9H063 256 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 SENP2Q9HC62 589 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 ASTN1O14525 1302 aa24■■□□□ 1.43
HSPG2-205ENST00000427897 A0A1W2PPC1 479 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 ADCY6O43306 1168 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 BMP8BP34820 402 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 ANTXR2P58335 489 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 TAPT1Q6NXT6 567 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 MORC4Q8TE76 937 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 WDR11Q9BZH6 1224 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 UPF3AQ9H1J1 476 aaKnown RBP23.99■■□□□ 1.43
HSPG2-205ENST00000427897 PPP4R2Q9NY27 417 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 PCDHA1Q9Y5I3 950 aa23.99■■□□□ 1.43
HSPG2-205ENST00000427897 MYADML2A6NDP7 307 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 DCDC2CA8MYV0 355 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 PQBP1O60828 265 aaKnown RBP23.98■■□□□ 1.43
HSPG2-205ENST00000427897 SMPD1P17405 629 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 CST5P28325 142 aaPredicted RBP23.98■■□□□ 1.43
HSPG2-205ENST00000427897 BEX3Q00994 111 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 TLE2Q04725 743 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 C1orf53Q5VUE5 145 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 SYNE3Q6ZMZ3 975 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 ZNF654Q8IZM8 581 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 PIBF1Q8WXW3 757 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 TBC1D5Q92609 795 aa23.98■■□□□ 1.43
HSPG2-205ENST00000427897 SLC34A2O95436 690 aa23.97■■□□□ 1.43
HSPG2-205ENST00000427897 IRX5P78411 483 aaPredicted RBP23.97■■□□□ 1.43
HSPG2-205ENST00000427897 TROAPQ12815 778 aa23.97■■□□□ 1.43
HSPG2-205ENST00000427897 ARHGEF16Q5VV41 709 aa23.97■■□□□ 1.43
HSPG2-205ENST00000427897 NSUN6Q8TEA1 469 aaKnown RBP23.97■■□□□ 1.43
HSPG2-205ENST00000427897 PIGSQ96S52 555 aa23.97■■□□□ 1.43
HSPG2-205ENST00000427897 LY9Q9HBG7 655 aa23.97■■□□□ 1.43
HSPG2-205ENST00000427897 Q9Y3F1 56 aa23.97■■□□□ 1.43
HSPG2-205ENST00000427897 ELP1O95163 1332 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 DDAH1O94760 285 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 CALM1P0DP23 149 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 CALM2P0DP24 149 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 CALM3P0DP25 149 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 GNAQP50148 359 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 SNX17Q15036 470 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 FSCN1Q16658 493 aaKnown RBP23.96■■□□□ 1.43
HSPG2-205ENST00000427897 SYTL5Q8TDW5 730 aaPredicted RBP23.96■■□□□ 1.43
HSPG2-205ENST00000427897 NEK1Q96PY6 1258 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 TAAR1Q96RJ0 339 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 RMDN3Q96TC7 470 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 MYL10Q9BUA6 226 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 PRO3102Q9H379 93 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 RIOX1Q9H6W3 641 aa23.96■■□□□ 1.43
HSPG2-205ENST00000427897 GNEQ9Y223 722 aaKnown RBP23.96■■□□□ 1.43
HSPG2-205ENST00000427897 MROH7Q68CQ1 1323 aa23.95■■□□□ 1.42
HSPG2-205ENST00000427897 LCTP09848 1927 aa23.95■■□□□ 1.42
HSPG2-205ENST00000427897 PNMA6FA0A0J9YX94 578 aa23.95■■□□□ 1.42
HSPG2-205ENST00000427897 FXR1P51114 621 aaKnown RBP eCLIP23.95■■□□□ 1.42
HSPG2-205ENST00000427897 KRT32Q14532 448 aa23.95■■□□□ 1.42
HSPG2-205ENST00000427897 DUSP28Q4G0W2 176 aa23.95■■□□□ 1.42
HSPG2-205ENST00000427897 BRDTQ58F21 947 aaPredicted RBP23.95■■□□□ 1.42
HSPG2-205ENST00000427897 CCSAPQ6IQ19 270 aaPredicted RBP23.95■■□□□ 1.42
HSPG2-205ENST00000427897 MAP3K14Q99558 947 aa23.95■■□□□ 1.42
HSPG2-205ENST00000427897 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.42
HSPG2-205ENST00000427897 SEC63Q9UGP8 760 aaKnown RBP23.95■■□□□ 1.42
HSPG2-205ENST00000427897 SLC12A7Q9Y666 1083 aa23.95■■□□□ 1.42
HSPG2-205ENST00000427897 A0A0U1RQG5 324 aaPredicted RBP23.94■■□□□ 1.42
HSPG2-205ENST00000427897 SH2B2O14492 632 aaPredicted RBP23.94■■□□□ 1.42
HSPG2-205ENST00000427897 CLTBP09497 229 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 PPP2R5BQ15173 497 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 STXBP2Q15833 593 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 OR6J1Q8NGC5 347 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 SCFD2Q8WU76 684 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 MTMR8Q96EF0 704 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 RRP36Q96EU6 259 aaKnown RBP23.94■■□□□ 1.42
HSPG2-205ENST00000427897 IWS1Q96ST2 819 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 LZTS2Q9BRK4 669 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 TMEM39AQ9NV64 488 aa23.94■■□□□ 1.42
HSPG2-205ENST00000427897 MAP3K20Q9NYL2 800 aaKnown RBP23.94■■□□□ 1.42
HSPG2-205ENST00000427897 TLR3O15455 904 aaKnown RBP23.93■■□□□ 1.42
HSPG2-205ENST00000427897 CABYRO75952 493 aa23.93■■□□□ 1.42
HSPG2-205ENST00000427897 LIFRP42702 1097 aa23.93■■□□□ 1.42
HSPG2-205ENST00000427897 FGD1P98174 961 aa23.93■■□□□ 1.42
HSPG2-205ENST00000427897 CXCL17Q6UXB2 119 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms