RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PNMA2Q9UL42 364 aa22.35■■□□□ 1.17
COL9A2-204ENST00000427563 SMPD1P17405 629 aa22.34■■□□□ 1.17
COL9A2-204ENST00000427563 EDNRBP24530 442 aa22.34■■□□□ 1.17
COL9A2-204ENST00000427563 ACLYP53396 1101 aa22.34■■□□□ 1.17
COL9A2-204ENST00000427563 KCNA10Q16322 511 aa22.34■■□□□ 1.17
COL9A2-204ENST00000427563 C1orf53Q5VUE5 145 aa22.34■■□□□ 1.17
COL9A2-204ENST00000427563 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
COL9A2-204ENST00000427563 TSEN34Q9BSV6 310 aaKnown RBP22.34■■□□□ 1.17
COL9A2-204ENST00000427563 ATP11BQ9Y2G3 1177 aa22.34■■□□□ 1.17
COL9A2-204ENST00000427563 ABCB11O95342 1321 aa22.33■■□□□ 1.17
COL9A2-204ENST00000427563 PRC1O43663 620 aa22.33■■□□□ 1.17
COL9A2-204ENST00000427563 CDC45O75419 566 aa22.33■■□□□ 1.17
COL9A2-204ENST00000427563 TNFAIP2Q03169 654 aa22.33■■□□□ 1.17
COL9A2-204ENST00000427563 FBXO11Q86XK2 927 aa22.33■■□□□ 1.17
COL9A2-204ENST00000427563 MYL10Q9BUA6 226 aa22.33■■□□□ 1.17
COL9A2-204ENST00000427563 RIOX1Q9H6W3 641 aa22.33■■□□□ 1.17
COL9A2-204ENST00000427563 ERICH2A1L162 156 aa22.32■■□□□ 1.16
COL9A2-204ENST00000427563 SH2B2O14492 632 aaPredicted RBP22.32■■□□□ 1.16
COL9A2-204ENST00000427563 DHX16O60231 1041 aaKnown RBP22.32■■□□□ 1.16
COL9A2-204ENST00000427563 C6orf222P0C671 652 aaPredicted RBP22.32■■□□□ 1.16
COL9A2-204ENST00000427563 BMP8BP34820 402 aa22.32■■□□□ 1.16
COL9A2-204ENST00000427563 BEX3Q00994 111 aa22.32■■□□□ 1.16
COL9A2-204ENST00000427563 SH3RF1Q7Z6J0 888 aa22.32■■□□□ 1.16
COL9A2-204ENST00000427563 SYTL5Q8TDW5 730 aaPredicted RBP22.32■■□□□ 1.16
COL9A2-204ENST00000427563 VTA1Q9NP79 307 aa22.32■■□□□ 1.16
COL9A2-204ENST00000427563 ADD3Q9UEY8 706 aaKnown RBP22.32■■□□□ 1.16
COL9A2-204ENST00000427563 RBM47A0AV96 593 aaKnown RBP22.31■■□□□ 1.16
COL9A2-204ENST00000427563 RASEFQ8IZ41 740 aa22.31■■□□□ 1.16
COL9A2-204ENST00000427563 TAAR1Q96RJ0 339 aa22.31■■□□□ 1.16
COL9A2-204ENST00000427563 PIGSQ96S52 555 aa22.31■■□□□ 1.16
COL9A2-204ENST00000427563 KIAA1217Q5T5P2 1943 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 LOC102724159A0A0B4J2E5 919 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 MOXD2PA6NHM9 499 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 ZBTB5O15062 677 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 ASGR1P07306 291 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 MDM2Q00987 491 aaPredicted RBP22.3■■□□□ 1.16
COL9A2-204ENST00000427563 TLE2Q04725 743 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 SART3Q15020 963 aaKnown RBP22.3■■□□□ 1.16
COL9A2-204ENST00000427563 PWP2Q15269 919 aaKnown RBP22.3■■□□□ 1.16
COL9A2-204ENST00000427563 ERICH6BQ5W0A0 696 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 IQSEC1Q6DN90 963 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 TLK2Q86UE8 772 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 ZNF654Q8IZM8 581 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 DNERQ8NFT8 737 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 LRRC2Q9BYS8 371 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 PDLIM7Q9NR12 457 aa22.3■■□□□ 1.16
COL9A2-204ENST00000427563 TRIM43BA6NCK2 446 aa22.29■■□□□ 1.16
COL9A2-204ENST00000427563 MCM5P33992 734 aa22.29■■□□□ 1.16
COL9A2-204ENST00000427563 GHRHRQ02643 423 aa22.29■■□□□ 1.16
COL9A2-204ENST00000427563 ADCK5Q3MIX3 580 aa22.29■■□□□ 1.16
COL9A2-204ENST00000427563 TRIM43Q96BQ3 446 aaPredicted RBP22.29■■□□□ 1.16
COL9A2-204ENST00000427563 MTA3Q9BTC8 594 aa22.29■■□□□ 1.16
COL9A2-204ENST00000427563 AMNQ9BXJ7 453 aa22.29■■□□□ 1.16
COL9A2-204ENST00000427563 MRPL11Q9Y3B7 192 aaKnown RBP22.29■■□□□ 1.16
COL9A2-204ENST00000427563 DYNC1LI2O43237 492 aaPredicted RBP22.28■■□□□ 1.16
COL9A2-204ENST00000427563 ITGB8P26012 769 aa22.28■■□□□ 1.16
COL9A2-204ENST00000427563 GNASQ5JWF2 1037 aa22.28■■□□□ 1.16
COL9A2-204ENST00000427563 CATIPQ7Z7H3 387 aa22.28■■□□□ 1.16
COL9A2-204ENST00000427563 HOMER1Q86YM7 354 aa22.28■■□□□ 1.16
COL9A2-204ENST00000427563 NUP133Q8WUM0 1156 aa22.28■■□□□ 1.16
COL9A2-204ENST00000427563 STARD7Q9NQZ5 370 aa22.28■■□□□ 1.16
COL9A2-204ENST00000427563 SOX1O00570 391 aaPredicted RBP22.27■■□□□ 1.16
COL9A2-204ENST00000427563 DDAH1O94760 285 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 CDK7P50613 346 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 HSD17B4P51659 736 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 DUSP28Q4G0W2 176 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 CASC1Q6TDU7 716 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 NOL8Q76FK4 1167 aaKnown RBP22.27■■□□□ 1.16
COL9A2-204ENST00000427563 TMEM87BQ96K49 555 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 MAP3K14Q99558 947 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 MAF1Q9H063 256 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 Q9Y3F1 56 aa22.27■■□□□ 1.16
COL9A2-204ENST00000427563 A0A1W2PPC1 479 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 ARIH2O95376 493 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 PLEKHA8P1O95397 391 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 RXRAP19793 462 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 LIFRP42702 1097 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 EXOSC10Q01780 885 aaKnown RBP22.26■■□□□ 1.15
COL9A2-204ENST00000427563 TSGA10IPQ3SY00 556 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 RAB11FIP4Q86YS3 637 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 PCSK9Q8NBP7 692 aaKnown RBP22.26■■□□□ 1.15
COL9A2-204ENST00000427563 COPS5Q92905 334 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 TCEANC2Q96MN5 208 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 WDR11Q9BZH6 1224 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 SPC25Q9HBM1 224 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 PCDHA1Q9Y5I3 950 aa22.26■■□□□ 1.15
COL9A2-204ENST00000427563 PQBP1O60828 265 aaKnown RBP22.25■■□□□ 1.15
COL9A2-204ENST00000427563 PDE4DQ08499 809 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 FAAP100Q0VG06 881 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 FSCN1Q16658 493 aaKnown RBP22.25■■□□□ 1.15
COL9A2-204ENST00000427563 CXCL17Q6UXB2 119 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 ANKRD33Q7Z3H0 272 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 MCF2L2Q86YR7 1114 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 SRBD1Q8N5C6 995 aaKnown RBP22.25■■□□□ 1.15
COL9A2-204ENST00000427563 KCNB2Q92953 911 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 PRDM5Q9NQX1 630 aaPredicted RBP22.25■■□□□ 1.15
COL9A2-204ENST00000427563 GRIN2DO15399 1336 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 ELP1O95163 1332 aa22.25■■□□□ 1.15
COL9A2-204ENST00000427563 PNMA6FA0A0J9YX94 578 aa22.24■■□□□ 1.15
COL9A2-204ENST00000427563 CFBP00751 764 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms