RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CCT6AP40227 531 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 ADKP55263 362 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 RBM10P98175 930 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 SPAG1Q07617 926 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 SEMA3FQ13275 785 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 STIM1Q13586 685 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 KRT31Q15323 416 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 TMEM139Q8IV31 216 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 TC2NQ8N9U0 490 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 CCDC47Q96A33 483 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 RAB34Q9BZG1 259 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 TRIM9Q9C026 710 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 GLT8D2Q9H1C3 349 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 DDX25Q9UHL0 483 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 HDAC9Q9UKV0 1011 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 KIF2AO00139 706 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 CCP110O43303 1012 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 NDUFB10O96000 172 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 DPEP1P16444 411 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 ASIC1P78348 528 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 JAG1P78504 1218 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 IKQ13123 557 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 GRB10Q13322 594 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 SF3B2Q13435 895 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 GIMAP8Q8ND71 665 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 ANKRD20A12PQ8NF67 263 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 TSC1Q92574 1164 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 CDK5RAP3Q96JB5 506 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 BAG1Q99933 345 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 C7orf25Q9BPX7 421 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 LIMA1Q9UHB6 759 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3D-202ENST00000427494 COL4A5P29400 1685 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 TRIM49BA6NDI0 452 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 POTEMA6NI47 508 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 KCNJ18B7U540 433 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 VIL1P09327 827 aaKnown RBP15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 PBX1P40424 430 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 BAG6P46379 1132 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 AMPD3Q01432 767 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 KCNJ12Q14500 433 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 RRP1BQ14684 758 aaKnown RBP15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 DLGAP5Q15398 846 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 USP17L6PQ6QN14 398 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 GMCL1Q96IK5 515 aa15.72■□□□□ 0.11
APOBEC3D-202ENST00000427494 ARHGAP6O43182 974 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 SNAP25P60880 206 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 PDE4DQ08499 809 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 PDIA5Q14554 519 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 DEFB132Q7Z7B7 95 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 PPFIBP1Q86W92 1011 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 CREBRFQ8IUR6 639 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 PNMA5Q96PV4 448 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 NAP1L4Q99733 375 aaKnown RBP15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 TAB2Q9NYJ8 693 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 ZNF70Q9UC06 446 aaPredicted RBP15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 STK17AQ9UEE5 414 aa15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
APOBEC3D-202ENST00000427494 AKR1B15C9JRZ8 316 aaPredicted RBP15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 H7C1D1 291 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 PSMA7O14818 248 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 N4BP3O15049 544 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 MARCH6O60337 910 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 BMP3P12645 472 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 GCFC2P16383 781 aaKnown RBP15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 KCNA3P22001 575 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 COPB1P53618 953 aaKnown RBP15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 SYDE2Q5VT97 1194 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 KRT79Q5XKE5 535 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 SV2BQ7L1I2 683 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 FCHSD1Q86WN1 690 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 OGFOD1Q8N543 542 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 SNX29Q8TEQ0 813 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 GMLQ99445 158 aa15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.1
APOBEC3D-202ENST00000427494 STX10O60499 249 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 PMS1P54277 932 aaKnown RBP15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 KIF18AQ8NI77 898 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 HAS1Q92839 578 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 TRIM47Q96LD4 638 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 AMNQ9BXJ7 453 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 ANO3Q9BYT9 981 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 VPS16Q9H269 839 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 BLOC1S4Q9NUP1 217 aa15.7■□□□□ 0.1
APOBEC3D-202ENST00000427494 RBL2Q08999 1139 aa15.69■□□□□ 0.1
APOBEC3D-202ENST00000427494 MCM6Q14566 821 aa15.69■□□□□ 0.1
APOBEC3D-202ENST00000427494 FBXO11Q86XK2 927 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms