RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 ADD3Q9UEY8 706 aaKnown RBP29.09■■■□□ 2.25
HERPUD2-205ENST00000427455 CNPY2Q9Y2B0 182 aa29.09■■■□□ 2.25
HERPUD2-205ENST00000427455 ASTN1O14525 1302 aa29.09■■■□□ 2.25
HERPUD2-205ENST00000427455 PDIA3P30101 505 aaKnown RBP29.08■■■□□ 2.25
HERPUD2-205ENST00000427455 ASB14A6NK59 587 aa29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 OPLAHO14841 1288 aa29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 SGPL1O95470 568 aa29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 ADD1P35611 737 aaKnown RBP29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 GHRHRQ02643 423 aa29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 ARMCX2Q7L311 632 aa29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 ZNF274Q96GC6 653 aaPredicted RBP29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 C22orf23Q9BZE7 217 aa29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 UPF2Q9HAU5 1272 aaKnown RBP29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.07■■■□□ 2.24
HERPUD2-205ENST00000427455 MCM3APO60318 1980 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 LRRC37A2A6NM11 1700 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 LOC102724159A0A0B4J2E5 919 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 CAPN2P17655 700 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 EN2P19622 333 aaPredicted RBP29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 CNGA1P29973 690 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 PWP2Q15269 919 aaKnown RBP29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 ANKRD1Q15327 319 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 SAMD3Q8N6K7 520 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 SHISA4Q96DD7 197 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 PURBQ96QR8 312 aaKnown RBP29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 FRMPD3Q5JV73 1810 aa29.06■■■□□ 2.24
HERPUD2-205ENST00000427455 SEPT4O43236 478 aa29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 MSCO60682 206 aa29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 SNAI1O95863 264 aaPredicted RBP29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 CFBP00751 764 aa29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 ALDH5A1P51649 535 aaPredicted RBP29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 PRAMEF19Q5SWL8 479 aa29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 DNERQ8NFT8 737 aa29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 SYTL5Q8TDW5 730 aaPredicted RBP29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 TBC1D5Q92609 795 aa29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 CRISPLD2Q9H0B8 497 aa29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 MAP3K20Q9NYL2 800 aaKnown RBP29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 DDX20Q9UHI6 824 aaKnown RBP29.05■■■□□ 2.24
HERPUD2-205ENST00000427455 hCG_1642624A0A1W2PR95 340 aa29.04■■■□□ 2.24
HERPUD2-205ENST00000427455 RBM25P49756 843 aaKnown RBP29.04■■■□□ 2.24
HERPUD2-205ENST00000427455 HSD17B4P51659 736 aa29.04■■■□□ 2.24
HERPUD2-205ENST00000427455 ABHD16BQ9H3Z7 469 aa29.04■■■□□ 2.24
HERPUD2-205ENST00000427455 ZNF865P0CJ78 1059 aaPredicted RBP29.03■■■□□ 2.24
HERPUD2-205ENST00000427455 NEK4P51957 841 aa29.03■■■□□ 2.24
HERPUD2-205ENST00000427455 AK2P54819 239 aa29.03■■■□□ 2.24
HERPUD2-205ENST00000427455 MORC4Q8TE76 937 aa29.03■■■□□ 2.24
HERPUD2-205ENST00000427455 MPHOSPH6Q99547 160 aaKnown RBP29.03■■■□□ 2.24
HERPUD2-205ENST00000427455 LARP6Q9BRS8 491 aaKnown RBP29.03■■■□□ 2.24
HERPUD2-205ENST00000427455 ZHX1Q9UKY1 873 aaPredicted RBP29.03■■■□□ 2.24
HERPUD2-205ENST00000427455 RGS19P49795 217 aa29.02■■■□□ 2.24
HERPUD2-205ENST00000427455 CCT2P78371 535 aaKnown RBP29.02■■■□□ 2.24
HERPUD2-205ENST00000427455 LHX8Q68G74 356 aa29.02■■■□□ 2.24
HERPUD2-205ENST00000427455 HEATR3Q7Z4Q2 680 aa29.02■■■□□ 2.24
HERPUD2-205ENST00000427455 NCOA5Q9HCD5 579 aaKnown RBP29.02■■■□□ 2.24
HERPUD2-205ENST00000427455 COL20A1Q9P218 1284 aa29.02■■■□□ 2.24
HERPUD2-205ENST00000427455 V9GY48 417 aaPredicted RBP29.02■■■□□ 2.24
HERPUD2-205ENST00000427455 GCOM1H8Y6P7 765 aaPredicted RBP29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 hCG_1984214I3L0E3 225 aa29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 TFRCP02786 760 aaKnown RBP29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 POLR2MP0CAP2 368 aa29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 ACVR2BQ13705 512 aa29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 ZNF713Q8N859 430 aaPredicted RBP29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 KATNBL1Q9H079 304 aa29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 RBM27Q9P2N5 1060 aaKnown RBP29.01■■■□□ 2.23
HERPUD2-205ENST00000427455 B4DLN1 442 aa29■■■□□ 2.23
HERPUD2-205ENST00000427455 AKR1A1P14550 325 aa29■■■□□ 2.23
HERPUD2-205ENST00000427455 IFNAR1P17181 557 aa29■■■□□ 2.23
HERPUD2-205ENST00000427455 MRPL12P52815 198 aaKnown RBP29■■■□□ 2.23
HERPUD2-205ENST00000427455 NTRK3Q16288 839 aa29■■■□□ 2.23
HERPUD2-205ENST00000427455 GPKOWQ92917 476 aaPredicted RBP eCLIP29■■■□□ 2.23
HERPUD2-205ENST00000427455 OGDHLQ9ULD0 1010 aa29■■■□□ 2.23
HERPUD2-205ENST00000427455 TPCN1Q9ULQ1 816 aa29■■■□□ 2.23
HERPUD2-205ENST00000427455 EDNRBP24530 442 aa28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 STK3Q13188 491 aa28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 WWC2Q6AWC2 1192 aa28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 PPP1R18Q6NYC8 613 aa28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 NSUN6Q8TEA1 469 aaKnown RBP28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 TAAR1Q96RJ0 339 aa28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 RMDN3Q96TC7 470 aa28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 KIF2CQ99661 725 aa28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 DDX49Q9Y6V7 483 aaKnown RBP28.99■■■□□ 2.23
HERPUD2-205ENST00000427455 HOXA13P31271 388 aaPredicted RBP28.98■■■□□ 2.23
HERPUD2-205ENST00000427455 ANKLE1Q8NAG6 615 aa28.98■■■□□ 2.23
HERPUD2-205ENST00000427455 RNF26Q9BY78 433 aaPredicted RBP28.98■■■□□ 2.23
HERPUD2-205ENST00000427455 VTA1Q9NP79 307 aa28.98■■■□□ 2.23
HERPUD2-205ENST00000427455 CPLX1O14810 134 aa28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 PRPF3O43395 683 aaKnown RBP28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 PDE4DQ08499 809 aa28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 PFKFB3Q16875 520 aaPredicted RBP28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 CPLX2Q6PUV4 134 aaKnown RBP28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 PHKBQ93100 1093 aa28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 SLKQ9H2G2 1235 aaPredicted RBP28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 FAM184BQ9ULE4 1060 aa28.97■■■□□ 2.23
HERPUD2-205ENST00000427455 PIK3CDO00329 1044 aa28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 PFKFB2O60825 505 aa28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 RARBP10826 455 aa28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 AKAP17AQ02040 695 aaKnown RBP28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 ARHGEF16Q5VV41 709 aa28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 FBXO16Q8IX29 292 aaPredicted RBP28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 CUL5Q93034 780 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms