RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 PRPHP41219 470 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 DMTNQ08495 405 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 TCP10Q12799 353 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 KCNK18Q7Z418 384 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 KRT222Q8N1A0 295 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 TBC1D22AQ8WUA7 517 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
FIRRE-201ENST00000427391 LGALS16A8MUM7 142 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 KIF5CO60282 957 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 ARHGAP25P42331 645 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 GRB10Q13322 594 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 KCNB1Q14721 858 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 ADGRF4Q8IZF3 695 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 KIAA0895Q8NCT3 520 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 ZNF507Q8TCN5 953 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 NAA15Q9BXJ9 866 aaKnown RBP13.02□□□□□ -0.32
FIRRE-201ENST00000427391 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.32
FIRRE-201ENST00000427391 MYMKA6NI61 221 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 ZBTB22O15209 634 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.33
FIRRE-201ENST00000427391 SHMT1P34896 483 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 CALCRLQ16602 461 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 CCDC96Q2M329 555 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 KIF4BQ2VIQ3 1234 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 PNMA5Q96PV4 448 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
FIRRE-201ENST00000427391 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L10C9JJH3 530 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 LAD1O00515 517 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 TAL1P17542 331 aaPredicted RBP13.02□□□□□ -0.33
FIRRE-201ENST00000427391 ADCY7P51828 1080 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 CDC42EP5Q6NZY7 148 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 TMTC1Q8IUR5 882 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 CNOT6LQ96LI5 555 aaKnown RBP13.02□□□□□ -0.33
FIRRE-201ENST00000427391 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.33
FIRRE-201ENST00000427391 SNAP25P60880 206 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 STIM1Q13586 685 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 LRRC41Q15345 812 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 ECM1Q16610 540 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 WDR59Q6PJI9 974 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 CYP26C1Q6V0L0 522 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
FIRRE-201ENST00000427391 RSRC2Q7L4I2 434 aaKnown RBP13.01□□□□□ -0.33
FIRRE-201ENST00000427391 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
FIRRE-201ENST00000427391 P2RX5Q93086 422 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 PARD6BQ9BYG5 372 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 SASH3O75995 380 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 IDEP14735 1019 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 FECHP22830 423 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 NOVP48745 357 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 ZFP91Q96JP5 570 aaPredicted RBP13.01□□□□□ -0.33
FIRRE-201ENST00000427391 MTMR9Q96QG7 549 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 SEMA6BQ9H3T3 888 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 FAM53CQ9NYF3 392 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 MAGEC2Q9UBF1 373 aaPredicted RBP13.01□□□□□ -0.33
FIRRE-201ENST00000427391 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
FIRRE-201ENST00000427391 ENC1O14682 589 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
FIRRE-201ENST00000427391 ZNF543Q08ER8 600 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 ILDR2Q71H61 639 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 KIAA0825Q8IV33 1275 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 AK8Q96MA6 479 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 PCMTD1Q96MG8 357 aaPredicted RBP13□□□□□ -0.33
FIRRE-201ENST00000427391 LUC7L2Q9Y383 392 aaKnown RBP13□□□□□ -0.33
FIRRE-201ENST00000427391 EPN1Q9Y6I3 576 aaPredicted RBP13□□□□□ -0.33
FIRRE-201ENST00000427391 IGKV6D-41A0A0C4DH26 115 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L15C9J2P7 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L13C9JLJ4 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L11C9JVI0 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L18D6R9N7 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L22D6RA61 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L17D6RBQ6 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L19D6RCP7 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L20D6RJB6 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 NDUFA10O95299 355 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 CCNE1P24864 410 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 MTIF2P46199 727 aaKnown RBP13□□□□□ -0.33
FIRRE-201ENST00000427391 PLA2G4AP47712 749 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 TBC1D8BQ0IIM8 1120 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L24Q0WX57 530 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 APOBEC3HQ6NTF7 200 aaKnown RBP13□□□□□ -0.33
FIRRE-201ENST00000427391 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 CCDC51Q96ER9 411 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 CALML4Q96GE6 196 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 THAP9Q9H5L6 903 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 DNAJC18Q9H819 358 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 HDAC6Q9UBN7 1215 aa13□□□□□ -0.33
FIRRE-201ENST00000427391 ZRANB2O95218 330 aaKnown RBP eCLIP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 TTLL1O95922 423 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms