RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 C9IYK1 514 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 PRRG2O14669 202 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 SHOXO15266 292 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 PRKCAP17252 672 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 BMP7P18075 431 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 EPHB3P54753 998 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 CYP4F8P98187 520 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 ZCCHC4Q9H5U6 513 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 KLHL14Q9P2G3 628 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 C3P01024 1663 aa8.32□□□□□ -1.08
C9orf3-205ENST00000427193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.31□□□□□ -1.08
C9orf3-205ENST00000427193 PLEKHD1A6NEE1 506 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 IRS4O14654 1257 aaPredicted RBP8.31□□□□□ -1.08
C9orf3-205ENST00000427193 FANCCQ00597 558 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 KIR3DS1Q14943 382 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 ANKRD39Q53RE8 183 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 RTP2Q5QGT7 225 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
C9orf3-205ENST00000427193 NUP43Q8NFH3 380 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 KCNC2Q96PR1 638 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 TNFRSF12AQ9NP84 129 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 PLA2R1Q13018 1463 aa8.31□□□□□ -1.08
C9orf3-205ENST00000427193 TCOF1Q13428 1488 aaKnown RBP8.31□□□□□ -1.08
C9orf3-205ENST00000427193 NPATQ14207 1427 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 FAM86C2PA6NEL3 165 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 CDR1P51861 262 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 MARCH10Q8NA82 808 aaPredicted RBP8.3□□□□□ -1.08
C9orf3-205ENST00000427193 RBBP8NLQ8NC74 664 aaPredicted RBP8.3□□□□□ -1.08
C9orf3-205ENST00000427193 TMEM52Q8NDY8 209 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 MZB1Q8WU39 189 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 DACT3Q96B18 629 aaPredicted RBP8.3□□□□□ -1.08
C9orf3-205ENST00000427193 BACH2Q9BYV9 841 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 REREQ9P2R6 1566 aa8.3□□□□□ -1.08
C9orf3-205ENST00000427193 CNTLNQ9NXG0 1405 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 AFF3P51826 1226 aaKnown RBP8.29□□□□□ -1.08
C9orf3-205ENST00000427193 CBX2Q14781 532 aaPredicted RBP8.29□□□□□ -1.08
C9orf3-205ENST00000427193 HLA-DQA1Q5Y7H0 255 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 NAT16Q8N8M0 369 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 PANK1Q8TE04 598 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 C20orf173Q96LM9 149 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 JMJD8Q96S16 334 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 SLC12A9Q9BXP2 914 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 SRRTQ9BXP5 876 aaKnown RBP8.29□□□□□ -1.08
C9orf3-205ENST00000427193 IMPACTQ9P2X3 320 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 AGLP35573 1532 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 EHBP1L1Q8N3D4 1523 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 PLCH2O75038 1416 aa8.29□□□□□ -1.08
C9orf3-205ENST00000427193 GSTM1P09488 218 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 NOL9Q5SY16 702 aaKnown RBP8.28□□□□□ -1.08
C9orf3-205ENST00000427193 TDRD10Q5VZ19 366 aaKnown RBP8.28□□□□□ -1.08
C9orf3-205ENST00000427193 CYP2R1Q6VVX0 501 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 TMC6Q7Z403 805 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 PPFIBP1Q86W92 1011 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 GP6Q9HCN6 339 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 FHOD1Q9Y613 1164 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 ALKQ9UM73 1620 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 CPS1P31327 1500 aa8.28□□□□□ -1.08
C9orf3-205ENST00000427193 ADAMTS20P59510 1910 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 NCOA2Q15596 1464 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 NUDT19A8MXV4 375 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 H0Y8X5 98 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 TRIM13O60858 407 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 GUCY2CP25092 1073 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 NOP2P46087 812 aaKnown RBP8.27□□□□□ -1.09
C9orf3-205ENST00000427193 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 DCAF15Q66K64 600 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 LDHDQ86WU2 507 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 AFAP1Q8N556 730 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 EPB41L4AQ9HCS5 686 aaPredicted RBP8.27□□□□□ -1.09
C9orf3-205ENST00000427193 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.09
C9orf3-205ENST00000427193 PTPRKQ15262 1439 aa8.27□□□□□ -1.09
C9orf3-205ENST00000427193 MTUS2Q5JR59 1369 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 A0A1W2PQ27 194 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 A0A1W2PQ64 194 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 A0A1W2PQC6 194 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 A0A1W2PQD8 194 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 ZNF445P59923 1031 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 NR1I3Q14994 352 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 AXDND1Q5T1B0 1012 aaPredicted RBP8.26□□□□□ -1.09
C9orf3-205ENST00000427193 FBXW10Q5XX13 1052 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 RPTNQ6XPR3 784 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 UNC5AQ6ZN44 842 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 IGDCC3Q8IVU1 814 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 TMEFF1Q8IYR6 380 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 RNF34Q969K3 372 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 RELTQ969Z4 430 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 KRTAP4-2Q9BYR5 136 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 PCDHGB7Q9Y5F8 929 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 RRBP1Q9P2E9 1410 aaKnown RBP8.26□□□□□ -1.09
C9orf3-205ENST00000427193 ZNF518AQ6AHZ1 1483 aa8.26□□□□□ -1.09
C9orf3-205ENST00000427193 ZNF142P52746 1687 aaPredicted RBP8.25□□□□□ -1.09
C9orf3-205ENST00000427193 A0A0G2JLL6 359 aaPredicted RBP8.25□□□□□ -1.09
C9orf3-205ENST00000427193 FGF10O15520 208 aaPredicted RBP8.25□□□□□ -1.09
C9orf3-205ENST00000427193 CD247P20963 164 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 MVKQ03426 396 aa8.25□□□□□ -1.09
C9orf3-205ENST00000427193 COL9A2Q14055 689 aaPredicted RBP8.25□□□□□ -1.09
C9orf3-205ENST00000427193 CNKSR3Q6P9H4 555 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms