RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ABCB11O95342 1321 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 LOC102724159A0A0B4J2E5 919 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 OPLAHO14841 1288 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 PRC1O43663 620 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 CDC45O75419 566 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 EDNRBP24530 442 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 SART3Q15020 963 aaKnown RBP21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 PWP2Q15269 919 aaKnown RBP21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 IQSEC1Q6DN90 963 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 FBXO11Q86XK2 927 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 MTA3Q9BTC8 594 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 COL20A1Q9P218 1284 aa21.36■■□□□ 1.01
SMARCAL1-205ENST00000425815 RBM47A0AV96 593 aaKnown RBP21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 MOXD2PA6NHM9 499 aa21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 DHX16O60231 1041 aaKnown RBP21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 C6orf222P0C671 652 aaPredicted RBP21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 DNERQ8NFT8 737 aa21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 SYTL5Q8TDW5 730 aaPredicted RBP21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 TAAR1Q96RJ0 339 aa21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 MAF1Q9H063 256 aa21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 VTA1Q9NP79 307 aa21.35■■□□□ 1.01
SMARCAL1-205ENST00000425815 SH2B2O14492 632 aaPredicted RBP21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 ZBTB5O15062 677 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 ASGR1P07306 291 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 MCM5P33992 734 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 BEX3Q00994 111 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 TLE2Q04725 743 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 GNASQ5JWF2 1037 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 SH3RF1Q7Z6J0 888 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 CATIPQ7Z7H3 387 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 RASEFQ8IZ41 740 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 PIGSQ96S52 555 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 MYL10Q9BUA6 226 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 AMNQ9BXJ7 453 aa21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 MRPL11Q9Y3B7 192 aaKnown RBP21.34■■□□□ 1.01
SMARCAL1-205ENST00000425815 LCTP09848 1927 aa21.33■■□□□ 1.01
SMARCAL1-205ENST00000425815 DYNC1LI2O43237 492 aaPredicted RBP21.33■■□□□ 1.01
SMARCAL1-205ENST00000425815 NOL8Q76FK4 1167 aaKnown RBP21.33■■□□□ 1.01
SMARCAL1-205ENST00000425815 TRIM43BA6NCK2 446 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 MDM2Q00987 491 aaPredicted RBP21.32■■□□□ 1
SMARCAL1-205ENST00000425815 TSGA10IPQ3SY00 556 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 DUSP28Q4G0W2 176 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 CASC1Q6TDU7 716 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 TLK2Q86UE8 772 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 MCF2L2Q86YR7 1114 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 ZNF654Q8IZM8 581 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 PCSK9Q8NBP7 692 aaKnown RBP21.32■■□□□ 1
SMARCAL1-205ENST00000425815 NUP133Q8WUM0 1156 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 TRIM43Q96BQ3 446 aaPredicted RBP21.32■■□□□ 1
SMARCAL1-205ENST00000425815 TMEM87BQ96K49 555 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 MAP3K14Q99558 947 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 LRRC2Q9BYS8 371 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 SPC25Q9HBM1 224 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 PDLIM7Q9NR12 457 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 Q9Y3F1 56 aa21.32■■□□□ 1
SMARCAL1-205ENST00000425815 A0A1W2PPC1 479 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 LIFRP42702 1097 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 CDK7P50613 346 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 EXOSC10Q01780 885 aaKnown RBP21.31■■□□□ 1
SMARCAL1-205ENST00000425815 GHRHRQ02643 423 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 ADCK5Q3MIX3 580 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 WDR11Q9BZH6 1224 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 STARD7Q9NQZ5 370 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 PCDHA1Q9Y5I3 950 aa21.31■■□□□ 1
SMARCAL1-205ENST00000425815 ELP1O95163 1332 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 MCM3APO60318 1980 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 DDAH1O94760 285 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 ITGB8P26012 769 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 HSD17B4P51659 736 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 PDE4DQ08499 809 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 ANKRD33Q7Z3H0 272 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 HOMER1Q86YM7 354 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 TMTC2Q8N394 836 aa21.3■■□□□ 1
SMARCAL1-205ENST00000425815 PNMA6FA0A0J9YX94 578 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 CFBP00751 764 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 NEFLP07196 543 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 FAAP100Q0VG06 881 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 FSCN1Q16658 493 aaKnown RBP21.29■■□□□ 1
SMARCAL1-205ENST00000425815 KCNB2Q92953 911 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 GLT1D1Q96MS3 346 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 TOX2Q96NM4 488 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 NEK1Q96PY6 1258 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 AP5M1Q9H0R1 490 aa21.29■■□□□ 1
SMARCAL1-205ENST00000425815 SOX1O00570 391 aaPredicted RBP21.28■■□□□ 1
SMARCAL1-205ENST00000425815 PQBP1O60828 265 aaKnown RBP21.28■■□□□ 1
SMARCAL1-205ENST00000425815 RXRAP19793 462 aa21.28■■□□□ 1
SMARCAL1-205ENST00000425815 RNF20Q5VTR2 975 aa21.28■■□□□ 1
SMARCAL1-205ENST00000425815 CXCL17Q6UXB2 119 aa21.28■■□□□ 1
SMARCAL1-205ENST00000425815 SRBD1Q8N5C6 995 aaKnown RBP21.28■■□□□ 1
SMARCAL1-205ENST00000425815 NSUN6Q8TEA1 469 aaKnown RBP21.28■■□□□ 1
SMARCAL1-205ENST00000425815 RMDN3Q96TC7 470 aa21.28■■□□□ 1
SMARCAL1-205ENST00000425815 UBE2OQ9C0C9 1292 aaKnown RBP21.28■■□□□ 1
SMARCAL1-205ENST00000425815 PRDM5Q9NQX1 630 aaPredicted RBP21.28■■□□□ 1
SMARCAL1-205ENST00000425815 GRIN2DO15399 1336 aa21.28■■□□□ 1
SMARCAL1-205ENST00000425815 TRIOBPQ9H2D6 2365 aa21.28■■□□□ 1
SMARCAL1-205ENST00000425815 LRRC37A2A6NM11 1700 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 SZT2Q5T011 3432 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 CCDC69A6NI79 296 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 ARIH2O95376 493 aa21.27■■□□□ 1
SMARCAL1-205ENST00000425815 PLEKHA8P1O95397 391 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms