RNA–Protein interactions for RNA: ENST00000425731.7

ZIC4-202, Transcript of Zic family member 4, humanhuman

TSL 2 BASIC

Gene ZIC4, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-202ENST00000425731 ROBO2Q9HCK4 1378 aa11.91□□□□□ -0.5
ZIC4-202ENST00000425731 NAPAP54920 295 aa11.91□□□□□ -0.5
ZIC4-202ENST00000425731 LRRC14Q15048 493 aa11.91□□□□□ -0.5
ZIC4-202ENST00000425731 SEPT14Q6ZU15 432 aa11.91□□□□□ -0.5
ZIC4-202ENST00000425731 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
ZIC4-202ENST00000425731 DDX47Q9H0S4 455 aaKnown RBP11.91□□□□□ -0.5
ZIC4-202ENST00000425731 SENP2Q9HC62 589 aa11.91□□□□□ -0.5
ZIC4-202ENST00000425731 SNX12Q9UMY4 172 aa11.91□□□□□ -0.5
ZIC4-202ENST00000425731 AATKQ6ZMQ8 1374 aa11.91□□□□□ -0.5
ZIC4-202ENST00000425731 CEP152O94986 1710 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 ERFP50548 548 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 GFPT1Q06210 699 aaPredicted RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 NBPF9Q3BBW0 867 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 NUGGCQ68CJ6 796 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 MDM1Q8TC05 714 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 DDX23Q9BUQ8 820 aaKnown RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 ZNF609O15014 1411 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 ARAP3Q8WWN8 1544 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 RNF17Q9BXT8 1623 aaKnown RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 PALMO75781 387 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 ALDH3A1P30838 453 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 SMTNP53814 917 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 LRRC41Q15345 812 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 ZNF449Q6P9G9 518 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 FOXP1Q9H334 677 aaPredicted RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 NOD2Q9HC29 1040 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 KCND1Q9NSA2 647 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 PRR36Q9H6K5 1346 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 hCG_2014768A0A024R1R8 64 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 SH2B2O14492 632 aaPredicted RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 SUN1O94901 812 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 IGHMBP2P38935 993 aaKnown RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 CRYMQ14894 314 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 ZNF658Q5TYW1 1059 aaPredicted RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 SV2BQ7L1I2 683 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 MARCH10Q8NA82 808 aaPredicted RBP11.9□□□□□ -0.5
ZIC4-202ENST00000425731 MCUR1Q96AQ8 359 aa11.9□□□□□ -0.5
ZIC4-202ENST00000425731 FAM107AO95990 144 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 CALML3P27482 149 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 KLK7P49862 253 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 CAPN12Q6ZSI9 719 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 TAOK1Q7L7X3 1001 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 CCDC105Q8IYK2 499 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 ZNF444Q8N0Y2 327 aaPredicted RBP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 WHAMMQ8TF30 809 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 SDR42E1Q8WUS8 393 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 PIK3R5Q8WYR1 880 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 GPKOWQ92917 476 aaPredicted RBP eCLIP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 KCNB2Q92953 911 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 OSBPL1AQ9BXW6 950 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 MROH2AA6NES4 1674 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 ANO9A1A5B4 782 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 TXNDC9O14530 226 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 PPP2R2AP63151 447 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 INF2Q27J81 1249 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 LRRC23Q53EV4 343 aaPredicted RBP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 C6orf163Q5TEZ5 329 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 CNNM4Q6P4Q7 775 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 TRAPPC11Q7Z392 1133 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 LONP2Q86WA8 852 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 TBC1D10CQ8IV04 446 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 IFNL3Q8IZI9 196 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 STAMBPL1Q96FJ0 436 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 ARHGEF10O15013 1369 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 LGALS16A8MUM7 142 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
ZIC4-202ENST00000425731 UQCRFS1P1P0C7P4 283 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 CABP7Q86V35 215 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 VPS52Q8N1B4 723 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 HOMER3Q9NSC5 361 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 ASIC3Q9UHC3 531 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 TBK1Q9UHD2 729 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 INTUQ9ULD6 942 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 TNKSO95271 1327 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 UBN2Q6ZU65 1347 aa11.89□□□□□ -0.51
ZIC4-202ENST00000425731 PRKAB2O43741 272 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 AP1G2O75843 785 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
ZIC4-202ENST00000425731 PDE6AP16499 860 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 FAM47AQ5JRC9 791 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 FAM47EQ6ZV65 393 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
ZIC4-202ENST00000425731 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.88□□□□□ -0.51
ZIC4-202ENST00000425731 FBXL5Q9UKA1 691 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 PFDN1O60925 122 aa11.88□□□□□ -0.51
ZIC4-202ENST00000425731 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms