RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
TUBA4A-204ENST00000425551 CCDC8Q9H0W5 538 aaPredicted RBP11.69□□□□□ -0.54
TUBA4A-204ENST00000425551 OSBPL3Q9H4L5 887 aa11.69□□□□□ -0.54
TUBA4A-204ENST00000425551 AKAP2Q9Y2D5 859 aa11.69□□□□□ -0.54
TUBA4A-204ENST00000425551 KMT2EQ8IZD2 1858 aa11.69□□□□□ -0.54
TUBA4A-204ENST00000425551 ACACBO00763 2458 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 ZNF536O15090 1300 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 TNKSO95271 1327 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 H0Y858 1186 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 LINC01565O15544 149 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 RAD21O60216 631 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 SNAP25P60880 206 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 ERVK-21P61565 698 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 OS9Q13438 667 aaPredicted RBP11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 TTC39AQ5SRH9 613 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 RNF135Q8IUD6 432 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 FTOQ9C0B1 505 aaKnown RBP eCLIP11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 TLR9Q9NR96 1032 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 MCM9Q9NXL9 1143 aa11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 DBNLQ9UJU6 430 aaKnown RBP11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 RALYQ9UKM9 306 aaKnown RBP11.68□□□□□ -0.54
TUBA4A-204ENST00000425551 CEP250Q9BV73 2442 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 CHD8Q9HCK8 2581 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 ICA1Q05084 483 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 TTC6Q86TZ1 520 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 LCORLQ8N3X6 602 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 DHX38Q92620 1227 aaKnown RBP11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 WNT8BQ93098 351 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 SLC9A7Q96T83 725 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 KCNH6Q9H252 994 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 ABHD16BQ9H3Z7 469 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 HOMER2Q9NSB8 354 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
TUBA4A-204ENST00000425551 TMEM221A6NGB7 291 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 M0R296 226 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 WDR46O15213 610 aaKnown RBP11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 NBNO60934 754 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 CSPG5O95196 566 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 UQCRFS1P1P0C7P4 283 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 NBPF20Q3BBV1 942 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 STK11IPQ8N1F8 1099 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 PHOSPHO2Q8TCD6 241 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 COPS5Q92905 334 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 PBXIP1Q96AQ6 731 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 LCTP09848 1927 aa11.66□□□□□ -0.54
TUBA4A-204ENST00000425551 MAP1BP46821 2468 aaKnown RBP11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 LGR5O75473 907 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 MX1P20591 662 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 PDE1AP54750 535 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 MBTPS1Q14703 1052 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 TMEM179Q6ZVK1 233 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 ADHFE1Q8IWW8 467 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 OTUD7AQ8TE49 926 aaPredicted RBP11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 EDAQ92838 391 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 EAF2Q96CJ1 260 aaPredicted RBP11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 MFSD14AQ96MC6 490 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 DCP1AQ9NPI6 582 aaPredicted RBP11.65□□□□□ -0.54
TUBA4A-204ENST00000425551 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 NAV1Q8NEY1 1877 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 MYL3P08590 195 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 CDK8P49336 464 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 PTPN5P54829 565 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 HIC1Q14526 733 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 COL19A1Q14993 1142 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 TRAF7Q6Q0C0 670 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 TRIM67Q6ZTA4 783 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 MSL3Q8N5Y2 521 aaKnown RBP11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 TGS1Q96RS0 853 aaKnown RBP11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 TEX13BQ9BXU2 312 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 SPC25Q9HBM1 224 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 GPR108Q9NPR9 543 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 LMCD1Q9NZU5 365 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 SIP14410 1827 aa11.64□□□□□ -0.55
TUBA4A-204ENST00000425551 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 GJB5O95377 273 aa11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 NDUFB10O96000 172 aa11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 CHMP4BP1P59074 171 aa11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 FAM47CQ5HY64 1035 aa11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 ANKRD35Q8N283 1001 aa11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 ATOH1Q92858 354 aaPredicted RBP11.63□□□□□ -0.55
TUBA4A-204ENST00000425551 KIFC2Q96AC6 838 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms