RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 PTPRFP10586 1907 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
MDC1-205ENST00000425072 PDHXO00330 501 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 MEIS2O14770 477 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 CFBP00751 764 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 CLK2P49760 499 aaKnown RBP11.78□□□□□ -0.52
MDC1-205ENST00000425072 HERVK_113P62684 666 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
MDC1-205ENST00000425072 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 JAKMIP3Q5VZ66 844 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 SHISA4Q96DD7 197 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.78□□□□□ -0.52
MDC1-205ENST00000425072 CNPY2Q9Y2B0 182 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 ELP1O95163 1332 aa11.78□□□□□ -0.52
MDC1-205ENST00000425072 SPTLC2O15270 562 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 PPP6R2O75170 966 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 ATP2B1P20020 1258 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 NASPP49321 788 aaPredicted RBP11.77□□□□□ -0.53
MDC1-205ENST00000425072 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.53
MDC1-205ENST00000425072 CCNA1P78396 465 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 CEBPZQ03701 1054 aaKnown RBP11.77□□□□□ -0.53
MDC1-205ENST00000425072 SREBF2Q12772 1141 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 PLS1Q14651 629 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 DEFB115Q30KQ5 88 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 TTC38Q5R3I4 469 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 SNRNP48Q6IEG0 339 aaKnown RBP11.77□□□□□ -0.53
MDC1-205ENST00000425072 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 NEK8Q86SG6 692 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 TMEM87AQ8NBN3 555 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 REPS2Q8NFH8 660 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 SMCR8Q8TEV9 937 aaPredicted RBP11.77□□□□□ -0.53
MDC1-205ENST00000425072 LEO1Q8WVC0 666 aaPredicted RBP11.77□□□□□ -0.53
MDC1-205ENST00000425072 USP28Q96RU2 1077 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.53
MDC1-205ENST00000425072 MORC2Q9Y6X9 1032 aaPredicted RBP11.77□□□□□ -0.53
MDC1-205ENST00000425072 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 B4DLN1 442 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 BTBD19C9JJ37 291 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 LAD1O00515 517 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 FIBPO43427 364 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 SLC10A3P09131 477 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 HSD17B4P51659 736 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 UBE2HP62256 183 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 GHRHRQ02643 423 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
MDC1-205ENST00000425072 RNF207Q6ZRF8 634 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 RASAL3Q86YV0 1011 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
MDC1-205ENST00000425072 GPRC5AQ8NFJ5 357 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 TBCKQ8TEA7 893 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 BRI3BPQ8WY22 251 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 PARK7Q99497 189 aaKnown RBP11.76□□□□□ -0.53
MDC1-205ENST00000425072 SPATC1LQ9H0A9 340 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 MROH8Q9H579 483 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 ACAD9Q9H845 621 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 LMBRD1Q9NUN5 540 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 RBPJLQ9UBG7 517 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 ZNF214Q9UL59 606 aaPredicted RBP11.76□□□□□ -0.53
MDC1-205ENST00000425072 CLIC4Q9Y696 253 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 RLFQ13129 1914 aa11.76□□□□□ -0.53
MDC1-205ENST00000425072 GCFC2P16383 781 aaKnown RBP11.75□□□□□ -0.53
MDC1-205ENST00000425072 ZNF76P36508 570 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 ME1P48163 572 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 TM4SF4P48230 202 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 ZNF174Q15697 407 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 INF2Q27J81 1249 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 LETM2Q2VYF4 491 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 ADALQ6DHV7 355 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 PPP4R3AQ6IN85 833 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 MOXD1Q6UVY6 613 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 FCHSD1Q86WN1 690 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 CLEC4DQ8WXI8 215 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 FERMT2Q96AC1 680 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 TMEM260Q9NX78 707 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
MDC1-205ENST00000425072 LOC285556D6RIA3 1793 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 OPLAHO14841 1288 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 STRNO43815 780 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 MARCH6O60337 910 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
MDC1-205ENST00000425072 CUTAO60888 179 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 MBD3O95983 291 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 CYP3A4P08684 503 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 CYP3A7P24462 503 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 MLLT1Q03111 559 aaPredicted RBP11.74□□□□□ -0.53
MDC1-205ENST00000425072 NOGQ13253 232 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 UBE2SQ16763 222 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 EARS2Q5JPH6 523 aaKnown RBP11.74□□□□□ -0.53
MDC1-205ENST00000425072 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
MDC1-205ENST00000425072 XRRA1Q6P2D8 792 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
MDC1-205ENST00000425072 ANKRD35Q8N283 1001 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms