RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 SELENOOQ9BVL4 669 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 ACBD3Q9H3P7 528 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 B4DLN1 442 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 PRPF3O43395 683 aaKnown RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 GTPBP6O43824 516 aaPredicted RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 PTGER2P43116 358 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 SLC4A8Q2Y0W8 1093 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 IFIT1BQ5T764 474 aaKnown RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 KIAA1328Q86T90 577 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 GOLGA6L1Q8N7Z2 621 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 ZSCAN10Q96SZ4 725 aaPredicted RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 EFCC1Q9HA90 598 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 BAZ2AQ9UIF9 1905 aaKnown RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 DYNLL1P63167 89 aaKnown RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 TUBB4BP68371 445 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 MECOMQ03112 1051 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 SRBD1Q8N5C6 995 aaKnown RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 CAGE1Q8TC20 777 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 RASGRP4Q8TDF6 673 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 ESR2Q92731 530 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 RRP36Q96EU6 259 aaKnown RBP16.03■□□□□ 0.16
MSH5-206ENST00000423982 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 HAUS4Q9H6D7 363 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 KAT14Q9H8E8 782 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 SMARCAL1Q9NZC9 954 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 BCS1LQ9Y276 419 aa16.03■□□□□ 0.16
MSH5-206ENST00000423982 PPFIA4O75335 1185 aa16.02■□□□□ 0.16
MSH5-206ENST00000423982 SPAG1Q07617 926 aa16.02■□□□□ 0.16
MSH5-206ENST00000423982 TROAPQ12815 778 aa16.02■□□□□ 0.16
MSH5-206ENST00000423982 DZIP1Q86YF9 867 aaKnown RBP16.02■□□□□ 0.16
MSH5-206ENST00000423982 PSMB7Q99436 277 aa16.02■□□□□ 0.16
MSH5-206ENST00000423982 DUOX1Q9NRD9 1551 aa16.02■□□□□ 0.15
MSH5-206ENST00000423982 RASSF10A6NK89 507 aa16.02■□□□□ 0.15
MSH5-206ENST00000423982 MFSD14BQ5SR56 506 aa16.02■□□□□ 0.15
MSH5-206ENST00000423982 PAPD7Q5XG87 772 aaKnown RBP16.02■□□□□ 0.15
MSH5-206ENST00000423982 KRT26Q7Z3Y9 468 aa16.02■□□□□ 0.15
MSH5-206ENST00000423982 DNAJC7Q99615 494 aa16.02■□□□□ 0.15
MSH5-206ENST00000423982 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.15
MSH5-206ENST00000423982 POLD4Q9HCU8 107 aa16.02■□□□□ 0.15
MSH5-206ENST00000423982 JADE2Q9NQC1 790 aa16.02■□□□□ 0.15
MSH5-206ENST00000423982 ZNF277Q9NRM2 450 aaPredicted RBP16.02■□□□□ 0.15
MSH5-206ENST00000423982 DOCK2Q92608 1830 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 PLEKP08567 350 aaPredicted RBP16.01■□□□□ 0.15
MSH5-206ENST00000423982 TRIM14Q14142 442 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 DNAJC21Q5F1R6 531 aaKnown RBP16.01■□□□□ 0.15
MSH5-206ENST00000423982 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 ZNF507Q8TCN5 953 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 C7orf43Q8WVR3 580 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 VIPAS39Q9H9C1 493 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 EHD2Q9NZN4 543 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 LGALS16A8MUM7 142 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 MATR3P43243 847 aaKnown RBP eCLIP16.01■□□□□ 0.15
MSH5-206ENST00000423982 NLRP5P59047 1200 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 LRRC15Q8TF66 581 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 CRACR2AQ9BSW2 395 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 PIM2Q9P1W9 311 aa16.01■□□□□ 0.15
MSH5-206ENST00000423982 IDEP14735 1019 aa16■□□□□ 0.15
MSH5-206ENST00000423982 GNAT2P19087 354 aa16■□□□□ 0.15
MSH5-206ENST00000423982 STAT6P42226 847 aa16■□□□□ 0.15
MSH5-206ENST00000423982 CCT5P48643 541 aa16■□□□□ 0.15
MSH5-206ENST00000423982 SLC7A5Q01650 507 aa16■□□□□ 0.15
MSH5-206ENST00000423982 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
MSH5-206ENST00000423982 PPIP5K2O43314 1243 aa16■□□□□ 0.15
MSH5-206ENST00000423982 LDHBP07195 334 aaKnown RBP16■□□□□ 0.15
MSH5-206ENST00000423982 TUBBP07437 444 aa16■□□□□ 0.15
MSH5-206ENST00000423982 NAALADL2Q58DX5 795 aa16■□□□□ 0.15
MSH5-206ENST00000423982 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
MSH5-206ENST00000423982 ICE2Q659A1 982 aa16■□□□□ 0.15
MSH5-206ENST00000423982 ADSSL1Q8N142 457 aa16■□□□□ 0.15
MSH5-206ENST00000423982 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
MSH5-206ENST00000423982 NSUN4Q96CB9 384 aaKnown RBP16■□□□□ 0.15
MSH5-206ENST00000423982 TRIM47Q96LD4 638 aa16■□□□□ 0.15
MSH5-206ENST00000423982 NHEJ1Q9H9Q4 299 aaPredicted RBP16■□□□□ 0.15
MSH5-206ENST00000423982 BRMS1Q9HCU9 246 aa16■□□□□ 0.15
MSH5-206ENST00000423982 DMGDHQ9UI17 866 aaKnown RBP16■□□□□ 0.15
MSH5-206ENST00000423982 CAPN11Q9UMQ6 739 aa16■□□□□ 0.15
MSH5-206ENST00000423982 JRKLQ9Y4A0 524 aa16■□□□□ 0.15
MSH5-206ENST00000423982 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
MSH5-206ENST00000423982 CNTNAP5Q8WYK1 1306 aa16■□□□□ 0.15
MSH5-206ENST00000423982 MYH10P35580 1976 aa15.99■□□□□ 0.15
MSH5-206ENST00000423982 ZNF263O14978 683 aa15.99■□□□□ 0.15
MSH5-206ENST00000423982 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
MSH5-206ENST00000423982 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
MSH5-206ENST00000423982 TRIM21P19474 475 aaKnown RBP15.99■□□□□ 0.15
MSH5-206ENST00000423982 CXCR5P32302 372 aa15.99■□□□□ 0.15
MSH5-206ENST00000423982 GTF2A1P52655 376 aaPredicted RBP15.99■□□□□ 0.15
MSH5-206ENST00000423982 MAP9Q49MG5 647 aa15.99■□□□□ 0.15
MSH5-206ENST00000423982 GPKOWQ92917 476 aaPredicted RBP eCLIP15.99■□□□□ 0.154e-8■■■■□ 19.5
MSH5-206ENST00000423982 H7C1D1 291 aa15.98■□□□□ 0.15
MSH5-206ENST00000423982 SND1Q7KZF4 910 aaKnown RBP eCLIP15.98■□□□□ 0.15
MSH5-206ENST00000423982 MICALL1Q8N3F8 863 aa15.98■□□□□ 0.15
MSH5-206ENST00000423982 RASSF8Q8NHQ8 419 aa15.98■□□□□ 0.15
MSH5-206ENST00000423982 LRRC1Q9BTT6 524 aa15.98■□□□□ 0.15
MSH5-206ENST00000423982 MAGEB6P1A0A0J9YX57 407 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms