RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 OLFML3Q9NRN5 406 aa10.08□□□□□ -0.8
CD109-202ENST00000422508 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 KRT87PA6NCN2 255 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 PPCSQ9HAB8 311 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 SLC8A2Q9UPR5 921 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 PODXLO00592 558 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 GAP43P17677 238 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 SESTD1Q86VW0 696 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 ARHGEF25Q86VW2 580 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 PPP1R2P1Q96PQ5 205 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 C10orf88Q9H8K7 445 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 ASPSCR1Q9BZE9 553 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 CAPN9O14815 690 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 CRLF3Q8IUI8 442 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 MYCT1Q8N699 235 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 C19orf60Q96EN9 201 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 NOD1Q9Y239 953 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 CEP152O94986 1710 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 TMOD1P28289 359 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 SURF1Q15526 300 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 ADPGKQ9BRR6 497 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 GCOM2Q9BZD3 368 aaPredicted RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 CA4P22748 312 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 SERPINB4P48594 390 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 CAPRIN1Q14444 709 aaKnown RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.07□□□□□ -0.8
CD109-202ENST00000422508 SUPT20HQ8NEM7 779 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 SUCLA2Q9P2R7 463 aaPredicted RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 BLOC1S6Q9UL45 172 aa10.07□□□□□ -0.8
CD109-202ENST00000422508 ZNF644Q9H582 1327 aaPredicted RBP10.07□□□□□ -0.8
CD109-202ENST00000422508 CPP00450 1065 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 HSPA2P54652 639 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 AP3B1O00203 1094 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 MYO1EQ12965 1108 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 TNFAIP1Q13829 316 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 NLRX1Q86UT6 975 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 CHCHD3Q9NX63 227 aaKnown RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 ARMCX3Q9UH62 379 aaPredicted RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 MED23Q9ULK4 1368 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 PLB1Q6P1J6 1458 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 MORC3Q14149 939 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 KIF17Q9P2E2 1029 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 HESX1Q9UBX0 185 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 RRP15Q9Y3B9 282 aaKnown RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 AFDNP55196 1824 aaKnown RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 PGRMC1O00264 195 aaKnown RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 CIITAP33076 1130 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 TMTC4Q5T4D3 741 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 ARPP21Q9UBL0 812 aaPredicted RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 NFE2L3Q9Y4A8 694 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 PRAG1Q86YV5 1406 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 CHGBP05060 677 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 MAGEA9P43362 315 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 ING2Q9H160 280 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 SUN2Q9UH99 717 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 H0Y626 953 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 TRIM16O95361 564 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 EFHBQ8N7U6 833 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 SMARCAL1Q9NZC9 954 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 IVNS1ABPQ9Y6Y0 642 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 PLCH2O75038 1416 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 DENND4BO75064 1496 aaPredicted RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 MSH2P43246 934 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
CD109-202ENST00000422508 MYOCDQ8IZQ8 938 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 ICA1LQ8NDH6 482 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 TRIM62Q9BVG3 475 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 KDM4CQ9H3R0 1056 aa10.06□□□□□ -0.8
CD109-202ENST00000422508 KCNK3O14649 394 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 IRX1P78414 480 aaPredicted RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 N4BP2L2Q92802 583 aaPredicted RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 FMO2Q99518 471 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 KIAA1468Q9P260 1216 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 DEAF1O75398 565 aaPredicted RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 BFSP1Q12934 665 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 ZC3H12CQ9C0D7 883 aaKnown RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 COL4A3BPQ9Y5P4 624 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 CD109Q6YHK3 1445 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 ZNF263O14978 683 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 CDH2P19022 906 aaPredicted RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 POMGNT1Q8WZA1 660 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 SNX5Q9Y5X3 404 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 LAMC2Q13753 1193 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 MAPRE2Q15555 327 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 DHTKD1Q96HY7 919 aaPredicted RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 NVLO15381 856 aaKnown RBP10.05□□□□□ -0.8
CD109-202ENST00000422508 RFX1P22670 979 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 LRRC8AQ8IWT6 810 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 GRAMD1AQ96CP6 724 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 DSCC1Q9BVC3 393 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 BATF3Q9NR55 127 aa10.05□□□□□ -0.8
CD109-202ENST00000422508 CHMLP26374 656 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms