RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NUP188Q5SRE5 1749 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 RREB1Q92766 1687 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 NOTOA8MTQ0 251 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 GIPC1O14908 333 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 USP2O75604 605 aaPredicted RBP7.36□□□□□ -1.23
SFXN1-202ENST00000421887 EFEMP2O95967 443 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 USP17L7P0C7H9 530 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 RPL10P27635 214 aaKnown RBP7.36□□□□□ -1.23
SFXN1-202ENST00000421887 EFEMP1Q12805 493 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 FAM50AQ14320 339 aaKnown RBP7.36□□□□□ -1.23
SFXN1-202ENST00000421887 SLC14A2Q15849 920 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 CLEC16AQ2KHT3 1053 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 ACSF2Q96CM8 615 aaPredicted RBP7.36□□□□□ -1.23
SFXN1-202ENST00000421887 GPR20Q99678 358 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 BTG4Q9NY30 223 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 ZMYM5Q9UJ78 669 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 TACC3Q9Y6A5 838 aa7.36□□□□□ -1.23
SFXN1-202ENST00000421887 FAM83GA6ND36 823 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 HRKO00198 91 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 MAPK1P28482 360 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 FAM129CQ86XR2 697 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 TMEFF1Q8IYR6 380 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 LUC7LQ9NQ29 371 aaKnown RBP7.35□□□□□ -1.23
SFXN1-202ENST00000421887 FAM8A1Q9UBU6 413 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 NRAPQ86VF7 1730 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 ABCA3Q99758 1704 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 TNS3Q68CZ2 1445 aa7.35□□□□□ -1.23
SFXN1-202ENST00000421887 ARHGEF10O15013 1369 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 NUP155O75694 1391 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 NEXMIFQ5QGS0 1516 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 SHISA3A0PJX4 238 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 UPK3BL1B0FP48 263 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 UPK3BL2E5RIL1 263 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 FRMD5Q7Z6J6 570 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 MZB1Q8WU39 189 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 CYB5D2Q8WUJ1 264 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 PWWP2AQ96N64 755 aa7.34□□□□□ -1.23
SFXN1-202ENST00000421887 COL14A1Q05707 1796 aaKnown RBP7.33□□□□□ -1.24
SFXN1-202ENST00000421887 IRS4O14654 1257 aaPredicted RBP7.33□□□□□ -1.24
SFXN1-202ENST00000421887 CILPO75339 1184 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 TNNI2P48788 182 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 CDR1P51861 262 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 OLFML2BQ68BL8 750 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 LINC01356Q8N9X3 169 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 FAM13CQ8NE31 585 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 G6PC3Q9BUM1 346 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 C12orf49Q9H741 205 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 SPG7Q9UQ90 795 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 NAIPQ13075 1403 aa7.33□□□□□ -1.24
SFXN1-202ENST00000421887 RGPD8O14715 1765 aaPredicted RBP7.33□□□□□ -1.24
SFXN1-202ENST00000421887 SPATA31A5Q5VU36 1347 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 SPATA31A7Q8IWB4 1347 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 THSD7AQ9UPZ6 1657 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 SOWAHDA6NJG2 315 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 RTP5Q14D33 572 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 ALG1LQ6GMV1 187 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 WAPLQ7Z5K2 1190 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 RNF141Q8WVD5 230 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 CRTAC1Q9NQ79 661 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 ADAM30Q9UKF2 790 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 PRAG1Q86YV5 1406 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 NRKQ7Z2Y5 1582 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 FMN2Q9NZ56 1722 aa7.32□□□□□ -1.24
SFXN1-202ENST00000421887 RBM47A0AV96 593 aaKnown RBP7.31□□□□□ -1.24
SFXN1-202ENST00000421887 NRDCO43847 1150 aa7.31□□□□□ -1.24
SFXN1-202ENST00000421887 PRICKLE3O43900 615 aaPredicted RBP7.31□□□□□ -1.24
SFXN1-202ENST00000421887 CCDC85BQ15834 202 aaPredicted RBP7.31□□□□□ -1.24
SFXN1-202ENST00000421887 HHIPL2Q6UWX4 724 aa7.31□□□□□ -1.24
SFXN1-202ENST00000421887 MIR1-1HGQ9H1L0 117 aa7.31□□□□□ -1.24
SFXN1-202ENST00000421887 MYRFQ9Y2G1 1151 aa7.31□□□□□ -1.24
SFXN1-202ENST00000421887 SBNO1A3KN83 1393 aa7.31□□□□□ -1.24
SFXN1-202ENST00000421887 RRBP1Q9P2E9 1410 aaKnown RBP7.3□□□□□ -1.24
SFXN1-202ENST00000421887 PLCG1P19174 1290 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 RPS26P62854 115 aaKnown RBP7.3□□□□□ -1.24
SFXN1-202ENST00000421887 GPR162Q16538 588 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 MAP3K11Q16584 847 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 SYT17Q9BSW7 474 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 PRDM11Q9NQV5 511 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 STK26Q9P289 416 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 USP35Q9P2H5 1018 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 PALD1Q9ULE6 856 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 CORINQ9Y5Q5 1042 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 MYOM1P52179 1685 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 CLTCL1P53675 1640 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 IFT172Q9UG01 1749 aa7.3□□□□□ -1.24
SFXN1-202ENST00000421887 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
SFXN1-202ENST00000421887 YBX1P67809 324 aaKnown RBP7.29□□□□□ -1.24
SFXN1-202ENST00000421887 IGDCC3Q8IVU1 814 aa7.29□□□□□ -1.24
SFXN1-202ENST00000421887 JARID2Q92833 1246 aaPredicted RBP7.29□□□□□ -1.24
SFXN1-202ENST00000421887 ASCC2Q9H1I8 757 aaPredicted RBP7.29□□□□□ -1.24
SFXN1-202ENST00000421887 ZNF281Q9Y2X9 895 aa7.29□□□□□ -1.24
SFXN1-202ENST00000421887 SPATA31A1Q5TZJ5 1347 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 RPGRIP1LQ68CZ1 1315 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 DLC1Q96QB1 1528 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 ABLIM1O14639 778 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 SUV39H1O43463 412 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 PNLIPP16233 465 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms