RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 HIPK3Q9H422 1215 aa21.96■■□□□ 1.11
AC004540.1-203ENST00000421862 ADD3Q9UEY8 706 aaKnown RBP21.96■■□□□ 1.11
AC004540.1-203ENST00000421862 MTMR7Q9Y216 660 aa21.96■■□□□ 1.11
AC004540.1-203ENST00000421862 UMODL1Q5DID0 1318 aa21.96■■□□□ 1.11
AC004540.1-203ENST00000421862 CCDC171Q6TFL3 1326 aa21.96■■□□□ 1.11
AC004540.1-203ENST00000421862 WDR19Q8NEZ3 1342 aa21.96■■□□□ 1.11
AC004540.1-203ENST00000421862 MUC3AQ02505 3323 aa21.96■■□□□ 1.11
AC004540.1-203ENST00000421862 RBM47A0AV96 593 aaKnown RBP21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 DYNC1LI2O43237 492 aaPredicted RBP21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 ACRP10323 421 aa21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 PBX2P40425 430 aa21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 BAATQ14032 418 aaPredicted RBP21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 SLC30A10Q6XR72 485 aa21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 CLEC4DQ8WXI8 215 aa21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 NOC4LQ9BVI4 516 aaKnown RBP21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 FRMPD2Q68DX3 1309 aaPredicted RBP21.95■■□□□ 1.1
AC004540.1-203ENST00000421862 B4GALT4O60513 344 aa21.94■■□□□ 1.1
AC004540.1-203ENST00000421862 NMIQ13287 307 aaPredicted RBP21.94■■□□□ 1.1
AC004540.1-203ENST00000421862 RRP12Q5JTH9 1297 aaKnown RBP21.94■■□□□ 1.1
AC004540.1-203ENST00000421862 TBC1D10CQ8IV04 446 aa21.94■■□□□ 1.1
AC004540.1-203ENST00000421862 WNT8AQ9H1J5 351 aa21.94■■□□□ 1.1
AC004540.1-203ENST00000421862 TOMM22Q9NS69 142 aa21.94■■□□□ 1.1
AC004540.1-203ENST00000421862 PNMA2Q9UL42 364 aa21.94■■□□□ 1.1
AC004540.1-203ENST00000421862 GRXCR1A8MXD5 290 aa21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 EDNRBP24530 442 aa21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 ZNF543Q08ER8 600 aa21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 PTPRSQ13332 1948 aa21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 KIAA1211Q6ZU35 1233 aa21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 USP38Q8NB14 1042 aa21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 TTC14Q96N46 770 aa21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 CXXC1Q9P0U4 656 aaPredicted RBP21.93■■□□□ 1.1
AC004540.1-203ENST00000421862 TRANK1O15050 2925 aa21.92■■□□□ 1.1
AC004540.1-203ENST00000421862 PSMC6P62333 389 aa21.92■■□□□ 1.1
AC004540.1-203ENST00000421862 AKNAD1Q5T1N1 836 aa21.92■■□□□ 1.1
AC004540.1-203ENST00000421862 VWCEQ96DN2 955 aa21.92■■□□□ 1.1
AC004540.1-203ENST00000421862 TRPV6Q9H1D0 765 aa21.92■■□□□ 1.1
AC004540.1-203ENST00000421862 ALDH8A1Q9H2A2 487 aaPredicted RBP21.92■■□□□ 1.1
AC004540.1-203ENST00000421862 GPCPD1Q9NPB8 672 aa21.92■■□□□ 1.1
AC004540.1-203ENST00000421862 NEDD4P46934 1319 aa21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 HAND2P61296 217 aa21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 PURAQ00577 322 aaKnown RBP21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 RAB30Q15771 203 aa21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 SMC5Q8IY18 1101 aa21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 WDR11Q9BZH6 1224 aa21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 MTIF3Q9H2K0 278 aaKnown RBP21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 POLR3EQ9NVU0 708 aa21.91■■□□□ 1.1
AC004540.1-203ENST00000421862 PTPDC1A2A3K4 754 aa21.9■■□□□ 1.1
AC004540.1-203ENST00000421862 NT5C2P49902 561 aa21.9■■□□□ 1.1
AC004540.1-203ENST00000421862 CPT1AP50416 773 aa21.9■■□□□ 1.1
AC004540.1-203ENST00000421862 RNF207Q6ZRF8 634 aa21.9■■□□□ 1.1
AC004540.1-203ENST00000421862 REV3LO60673 3130 aa21.89■■□□□ 1.1
AC004540.1-203ENST00000421862 FGBP02675 491 aa21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 RPS6P62753 249 aaKnown RBP21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 AAMPQ13685 434 aa21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 GPATCH4Q5T3I0 446 aaKnown RBP21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 MFSD6Q6ZSS7 791 aa21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 DNERQ8NFT8 737 aa21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 LNPKQ9C0E8 428 aa21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 RNF41Q9H4P4 317 aaPredicted RBP21.89■■□□□ 1.09
AC004540.1-203ENST00000421862 TRIP12Q14669 1992 aaPredicted RBP21.88■■□□□ 1.09
AC004540.1-203ENST00000421862 NKRFO15226 690 aaKnown RBP eCLIP21.88■■□□□ 1.09
AC004540.1-203ENST00000421862 CALML3P27482 149 aa21.88■■□□□ 1.09
AC004540.1-203ENST00000421862 CCL23P55773 120 aa21.88■■□□□ 1.09
AC004540.1-203ENST00000421862 GAS2L1Q99501 681 aaPredicted RBP21.88■■□□□ 1.09
AC004540.1-203ENST00000421862 OSBPL3Q9H4L5 887 aa21.88■■□□□ 1.09
AC004540.1-203ENST00000421862 TET1Q8NFU7 2136 aa21.88■■□□□ 1.09
AC004540.1-203ENST00000421862 TNKSO95271 1327 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 MFAP1P55081 439 aaKnown RBP21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 PPP2R5BQ15173 497 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 OTOP2Q7RTS6 562 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 DGKHQ86XP1 1220 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 OR6J1Q8NGC5 347 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 ESR2Q92731 530 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 MAF1Q9H063 256 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 PRDM12Q9H4Q4 367 aa21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 TRMT13Q9NUP7 481 aaKnown RBP21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 YBX2Q9Y2T7 364 aaKnown RBP21.87■■□□□ 1.09
AC004540.1-203ENST00000421862 RAD50Q92878 1312 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 COL4A4P53420 1690 aaPredicted RBP21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 TRIM6-TRIM34B2RNG4 842 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 PFKMP08237 780 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 SUPT20HL2P0C7V6 817 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 SDSP20132 328 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 RGS22Q8NE09 1264 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 SCFD2Q8WU76 684 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 SYMPKQ92797 1274 aaKnown RBP21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 MPHOSPH6Q99547 160 aaKnown RBP21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 MTG1Q9BT17 334 aaPredicted RBP21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 MSRAQ9UJ68 235 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 MYH7BA7E2Y1 1941 aa21.86■■□□□ 1.09
AC004540.1-203ENST00000421862 A6NJR5 290 aa21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 PDE4DQ08499 809 aa21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 ADGRE1Q14246 886 aa21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 TJAP1Q5JTD0 557 aa21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 RPUSD2Q8IZ73 545 aaKnown RBP21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 RILPL2Q969X0 211 aa21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 SCLYQ96I15 445 aa21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 NKX2-4Q9H2Z4 354 aa21.85■■□□□ 1.09
AC004540.1-203ENST00000421862 NFRKBQ6P4R8 1299 aa21.84■■□□□ 1.09
AC004540.1-203ENST00000421862 PLEKHM2Q8IWE5 1019 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms