RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 GRIN2DO15399 1336 aa22.2■■□□□ 1.14
VARS2-202ENST00000421263 DUSP28Q4G0W2 176 aa22.19■■□□□ 1.14
VARS2-202ENST00000421263 RGS22Q8NE09 1264 aa22.19■■□□□ 1.14
VARS2-202ENST00000421263 PTPDC1A2A3K4 754 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 TLR3O15455 904 aaKnown RBP22.18■■□□□ 1.14
VARS2-202ENST00000421263 ZEB2O60315 1214 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 KDM4AO75164 1064 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 ITGA7Q13683 1181 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 SLC30A10Q6XR72 485 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 RNF207Q6ZRF8 634 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 IQCA1Q86XH1 822 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.18■■□□□ 1.148e-8■■■■□ 24.4
VARS2-202ENST00000421263 TTYH1Q9H313 450 aaPredicted RBP22.18■■□□□ 1.14
VARS2-202ENST00000421263 ZSWIM5Q9P217 1185 aa22.18■■□□□ 1.14
VARS2-202ENST00000421263 LAMA4Q16363 1823 aa22.17■■□□□ 1.14
VARS2-202ENST00000421263 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.17■■□□□ 1.14
VARS2-202ENST00000421263 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.17■■□□□ 1.14
VARS2-202ENST00000421263 GOLGA8HP0CJ92 632 aa22.17■■□□□ 1.14
VARS2-202ENST00000421263 EDNRBP24530 442 aa22.17■■□□□ 1.14
VARS2-202ENST00000421263 RPS6P62753 249 aaKnown RBP22.17■■□□□ 1.14
VARS2-202ENST00000421263 PNMA1Q8ND90 353 aa22.17■■□□□ 1.14
VARS2-202ENST00000421263 DNERQ8NFT8 737 aa22.17■■□□□ 1.14
VARS2-202ENST00000421263 CDX2Q99626 313 aaPredicted RBP22.17■■□□□ 1.14
VARS2-202ENST00000421263 MAF1Q9H063 256 aa22.17■■□□□ 1.14
VARS2-202ENST00000421263 TMEM265A0A087WTH1 108 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 B4E1Z4 1266 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 DLL1O00548 723 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 PPIGQ13427 754 aaKnown RBP eCLIP22.16■■□□□ 1.142e-19■□□□□ 10.5
VARS2-202ENST00000421263 IMMTQ16891 758 aaKnown RBP22.16■■□□□ 1.14
VARS2-202ENST00000421263 TMEM240Q5SV17 173 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 RASIP1Q5U651 963 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 TMEM199Q8N511 208 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 ZSCAN10Q96SZ4 725 aaPredicted RBP22.16■■□□□ 1.14
VARS2-202ENST00000421263 WDR11Q9BZH6 1224 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 UBA5Q9GZZ9 404 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 CTNNA3Q9UI47 895 aa22.16■■□□□ 1.14
VARS2-202ENST00000421263 CSF2RAP15509 400 aa22.15■■□□□ 1.14
VARS2-202ENST00000421263 CALML3P27482 149 aa22.15■■□□□ 1.14
VARS2-202ENST00000421263 ENAHQ8N8S7 591 aaPredicted RBP22.15■■□□□ 1.14
VARS2-202ENST00000421263 IL25Q9H293 177 aa22.15■■□□□ 1.14
VARS2-202ENST00000421263 CPVLQ9H3G5 476 aa22.15■■□□□ 1.14
VARS2-202ENST00000421263 PDE4AP27815 886 aa22.14■■□□□ 1.13
VARS2-202ENST00000421263 PPP1R12CQ9BZL4 782 aa22.14■■□□□ 1.13
VARS2-202ENST00000421263 KAT14Q9H8E8 782 aa22.14■■□□□ 1.13
VARS2-202ENST00000421263 CYP2C18P33260 490 aa22.13■■□□□ 1.13
VARS2-202ENST00000421263 PSMC6P62333 389 aa22.13■■□□□ 1.13
VARS2-202ENST00000421263 ADGRF4Q8IZF3 695 aa22.13■■□□□ 1.13
VARS2-202ENST00000421263 KRT23Q9C075 422 aa22.13■■□□□ 1.13
VARS2-202ENST00000421263 SUPT16HQ9Y5B9 1047 aaKnown RBP22.13■■□□□ 1.13
VARS2-202ENST00000421263 UNC80Q8N2C7 3258 aa22.13■■□□□ 1.13
VARS2-202ENST00000421263 CDH23Q9H251 3354 aa22.13■■□□□ 1.13
VARS2-202ENST00000421263 TNKSO95271 1327 aa22.12■■□□□ 1.13
VARS2-202ENST00000421263 NKRFO15226 690 aaKnown RBP eCLIP22.12■■□□□ 1.13
VARS2-202ENST00000421263 PDE4DQ08499 809 aa22.12■■□□□ 1.13
VARS2-202ENST00000421263 CDC37Q16543 378 aaPredicted RBP22.12■■□□□ 1.13
VARS2-202ENST00000421263 ASPRV1Q53RT3 343 aa22.12■■□□□ 1.13
VARS2-202ENST00000421263 ZNF365Q70YC5 407 aa22.12■■□□□ 1.13
VARS2-202ENST00000421263 TBC1D5Q92609 795 aa22.12■■□□□ 1.13
VARS2-202ENST00000421263 MPHOSPH6Q99547 160 aaKnown RBP22.12■■□□□ 1.13
VARS2-202ENST00000421263 CNNM2Q9H8M5 875 aa22.12■■□□□ 1.13
VARS2-202ENST00000421263 POLR3EQ9NVU0 708 aa22.12■■□□□ 1.13
VARS2-202ENST00000421263 B4GALT4O60513 344 aa22.11■■□□□ 1.13
VARS2-202ENST00000421263 GSPT1P15170 499 aaKnown RBP22.11■■□□□ 1.13
VARS2-202ENST00000421263 PURAQ00577 322 aaKnown RBP22.11■■□□□ 1.13
VARS2-202ENST00000421263 USH1GQ495M9 461 aa22.11■■□□□ 1.13
VARS2-202ENST00000421263 TTC22Q5TAA0 569 aa22.11■■□□□ 1.13
VARS2-202ENST00000421263 SCFD2Q8WU76 684 aa22.11■■□□□ 1.13
VARS2-202ENST00000421263 TRPV6Q9H1D0 765 aa22.11■■□□□ 1.13
VARS2-202ENST00000421263 HIPK3Q9H422 1215 aa22.11■■□□□ 1.13
VARS2-202ENST00000421263 IL23AQ9NPF7 189 aa22.11■■□□□ 1.13
VARS2-202ENST00000421263 ABCB11O95342 1321 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 UMODL1Q5DID0 1318 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 A6NJR5 290 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 B4DLN1 442 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 ACRP10323 421 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 CPT1AP50416 773 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 MRPL12P52815 198 aaKnown RBP22.1■■□□□ 1.13
VARS2-202ENST00000421263 SEC23AQ15436 765 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 PSRC1Q6PGN9 363 aaPredicted RBP22.1■■□□□ 1.13
VARS2-202ENST00000421263 MYLIPQ8WY64 445 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 NOC4LQ9BVI4 516 aaKnown RBP22.1■■□□□ 1.13
VARS2-202ENST00000421263 ALDH8A1Q9H2A2 487 aaPredicted RBP22.1■■□□□ 1.13
VARS2-202ENST00000421263 JMJD4Q9H9V9 463 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 EYSQ5T1H1 3165 aa22.1■■□□□ 1.13
VARS2-202ENST00000421263 PARP1P09874 1014 aaKnown RBP22.09■■□□□ 1.13
VARS2-202ENST00000421263 DNAJB2P25686 324 aa22.09■■□□□ 1.13
VARS2-202ENST00000421263 QRICH1Q2TAL8 776 aa22.09■■□□□ 1.13
VARS2-202ENST00000421263 OR6J1Q8NGC5 347 aa22.09■■□□□ 1.13
VARS2-202ENST00000421263 SYTL5Q8TDW5 730 aaPredicted RBP22.09■■□□□ 1.13
VARS2-202ENST00000421263 HERVK_113Q902F9 699 aa22.09■■□□□ 1.13
VARS2-202ENST00000421263 TAAR1Q96RJ0 339 aa22.09■■□□□ 1.13
VARS2-202ENST00000421263 PPP2R5BQ15173 497 aa22.08■■□□□ 1.13
VARS2-202ENST00000421263 CCDC62Q6P9F0 684 aa22.08■■□□□ 1.13
VARS2-202ENST00000421263 MCF2L2Q86YR7 1114 aa22.08■■□□□ 1.13
VARS2-202ENST00000421263 COPS5Q92905 334 aa22.08■■□□□ 1.13
VARS2-202ENST00000421263 VWCEQ96DN2 955 aa22.08■■□□□ 1.13
VARS2-202ENST00000421263 MTG1Q9BT17 334 aaPredicted RBP22.08■■□□□ 1.13
VARS2-202ENST00000421263 WNT8AQ9H1J5 351 aa22.08■■□□□ 1.13
VARS2-202ENST00000421263 COL20A1Q9P218 1284 aa22.08■■□□□ 1.13
VARS2-202ENST00000421263 RAD50Q92878 1312 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms